Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATP13A4Q4VNC1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
ATP13A4Q4VNC1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP13A4Q4VNC1 AL391422.3-201ENST00000603791 2761 ntBASIC21.5■■□□□ 1.03
ATP13A4Q4VNC1 AL121603.2-201ENST00000557373 2117 ntBASIC21.5■■□□□ 1.03
ATP13A4Q4VNC1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP13A4Q4VNC1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
ATP13A4Q4VNC1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
ATP13A4Q4VNC1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 AC245052.3-201ENST00000450182 901 ntBASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP13A4Q4VNC1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 AC087623.3-201ENST00000607047 1098 ntBASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.48■■□□□ 1.03
ATP13A4Q4VNC1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 AC097381.1-201ENST00000429019 1296 ntBASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 KRT18P20-201ENST00000548986 1279 ntBASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP13A4Q4VNC1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 PCDHAC2-203ENST00000615316 3011 ntBASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.46■■□□□ 1.03
ATP13A4Q4VNC1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms