Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 ITM2C-210ENST00000620962 501 ntBASIC19.9■□□□□ 0.78
EPHA4P54764 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA4P54764 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.9■□□□□ 0.78
EPHA4P54764 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA4P54764 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA4P54764 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
EPHA4P54764 LINC00565-201ENST00000562710 2331 ntBASIC19.9■□□□□ 0.78
EPHA4P54764 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
EPHA4P54764 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.89■□□□□ 0.77
EPHA4P54764 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.89■□□□□ 0.77
EPHA4P54764 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
EPHA4P54764 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
EPHA4P54764 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
EPHA4P54764 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.89■□□□□ 0.77
EPHA4P54764 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
EPHA4P54764 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.89■□□□□ 0.77
EPHA4P54764 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
EPHA4P54764 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
EPHA4P54764 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EPHA4P54764 AC244015.2-201ENST00000616358 1861 ntBASIC19.88■□□□□ 0.77
EPHA4P54764 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
EPHA4P54764 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EPHA4P54764 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.88■□□□□ 0.77
EPHA4P54764 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
EPHA4P54764 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EPHA4P54764 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EPHA4P54764 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
EPHA4P54764 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
EPHA4P54764 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.88■□□□□ 0.77
EPHA4P54764 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EPHA4P54764 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EPHA4P54764 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
EPHA4P54764 AC105020.6-201ENST00000621523 1217 ntBASIC19.88■□□□□ 0.77
EPHA4P54764 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EPHA4P54764 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
EPHA4P54764 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EPHA4P54764 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
EPHA4P54764 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.88■□□□□ 0.77
EPHA4P54764 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EPHA4P54764 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.88■□□□□ 0.77
EPHA4P54764 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
EPHA4P54764 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.87■□□□□ 0.77
EPHA4P54764 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EPHA4P54764 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.87■□□□□ 0.77
EPHA4P54764 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.87■□□□□ 0.77
EPHA4P54764 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EPHA4P54764 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EPHA4P54764 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EPHA4P54764 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.87■□□□□ 0.77
EPHA4P54764 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.87■□□□□ 0.77
EPHA4P54764 PGM5P4-201ENST00000421970 445 ntBASIC19.87■□□□□ 0.77
EPHA4P54764 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EPHA4P54764 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.87■□□□□ 0.77
EPHA4P54764 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.87■□□□□ 0.77
EPHA4P54764 HLA-B-256ENST00000639848 1089 ntBASIC19.87■□□□□ 0.77
EPHA4P54764 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EPHA4P54764 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.87■□□□□ 0.77
EPHA4P54764 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
EPHA4P54764 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
EPHA4P54764 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
EPHA4P54764 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
EPHA4P54764 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EPHA4P54764 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EPHA4P54764 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.86■□□□□ 0.77
EPHA4P54764 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
EPHA4P54764 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.86■□□□□ 0.77
EPHA4P54764 UNC93B5-201ENST00000530315 699 ntBASIC19.86■□□□□ 0.77
EPHA4P54764 AC060766.5-201ENST00000590539 871 ntBASIC19.86■□□□□ 0.77
EPHA4P54764 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
EPHA4P54764 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
EPHA4P54764 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
EPHA4P54764 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
EPHA4P54764 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
EPHA4P54764 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.86■□□□□ 0.77
EPHA4P54764 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
EPHA4P54764 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
EPHA4P54764 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EPHA4P54764 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EPHA4P54764 AC087633.2-202ENST00000565166 1439 ntBASIC19.85■□□□□ 0.77
EPHA4P54764 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EPHA4P54764 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
EPHA4P54764 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EPHA4P54764 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EPHA4P54764 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
EPHA4P54764 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EPHA4P54764 KRT18P29-201ENST00000397031 1267 ntBASIC19.85■□□□□ 0.77
EPHA4P54764 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EPHA4P54764 ESRRAP1-201ENST00000400596 1257 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms