Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.7■■□□□ 1.38
LBX1P52954 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.7■■□□□ 1.38
LBX1P52954 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.7■■□□□ 1.38
LBX1P52954 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.7■■□□□ 1.38
LBX1P52954 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LBX1P52954 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LBX1P52954 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LBX1P52954 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LBX1P52954 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LBX1P52954 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
LBX1P52954 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
LBX1P52954 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LBX1P52954 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.69■■□□□ 1.38
LBX1P52954 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
LBX1P52954 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
LBX1P52954 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.69■■□□□ 1.38
LBX1P52954 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
LBX1P52954 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.69■■□□□ 1.38
LBX1P52954 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.69■■□□□ 1.38
LBX1P52954 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
LBX1P52954 AL691432.3-201ENST00000621860 400 ntBASIC23.69■■□□□ 1.38
LBX1P52954 AC093458.2-201ENST00000623150 629 ntBASIC23.69■■□□□ 1.38
LBX1P52954 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
LBX1P52954 MYC-208ENST00000641036 567 ntBASIC23.69■■□□□ 1.38
LBX1P52954 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LBX1P52954 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LBX1P52954 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
LBX1P52954 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
LBX1P52954 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LBX1P52954 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LBX1P52954 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LBX1P52954 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.68■■□□□ 1.38
LBX1P52954 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
LBX1P52954 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
LBX1P52954 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LBX1P52954 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.68■■□□□ 1.38
LBX1P52954 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LBX1P52954 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.68■■□□□ 1.38
LBX1P52954 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LBX1P52954 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.68■■□□□ 1.38
LBX1P52954 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.68■■□□□ 1.38
LBX1P52954 CLEC4GP1-201ENST00000596555 870 ntBASIC23.68■■□□□ 1.38
LBX1P52954 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LBX1P52954 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LBX1P52954 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LBX1P52954 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.67■■□□□ 1.38
LBX1P52954 AC022211.4-201ENST00000625094 2161 ntBASIC23.67■■□□□ 1.38
LBX1P52954 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.67■■□□□ 1.38
LBX1P52954 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC23.67■■□□□ 1.38
LBX1P52954 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
LBX1P52954 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.67■■□□□ 1.38
LBX1P52954 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
LBX1P52954 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.67■■□□□ 1.38
LBX1P52954 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.67■■□□□ 1.38
LBX1P52954 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
LBX1P52954 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LBX1P52954 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LBX1P52954 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
LBX1P52954 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
LBX1P52954 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.66■■□□□ 1.38
LBX1P52954 AP000347.1-202ENST00000435868 847 ntBASIC23.66■■□□□ 1.38
LBX1P52954 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
LBX1P52954 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC23.66■■□□□ 1.38
LBX1P52954 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC23.66■■□□□ 1.38
LBX1P52954 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.66■■□□□ 1.38
LBX1P52954 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LBX1P52954 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.66■■□□□ 1.38
LBX1P52954 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
LBX1P52954 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LBX1P52954 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.66■■□□□ 1.38
LBX1P52954 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.66■■□□□ 1.38
LBX1P52954 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LBX1P52954 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LBX1P52954 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LBX1P52954 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LBX1P52954 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.65■■□□□ 1.38
LBX1P52954 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LBX1P52954 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LBX1P52954 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.65■■□□□ 1.38
LBX1P52954 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LBX1P52954 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LBX1P52954 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LBX1P52954 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LBX1P52954 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.65■■□□□ 1.38
LBX1P52954 AC007322.3-201ENST00000426526 701 ntBASIC23.65■■□□□ 1.38
LBX1P52954 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LBX1P52954 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.65■■□□□ 1.38
LBX1P52954 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.65■■□□□ 1.38
LBX1P52954 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.65■■□□□ 1.38
LBX1P52954 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LBX1P52954 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LBX1P52954 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
LBX1P52954 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
LBX1P52954 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.64■■□□□ 1.38
LBX1P52954 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.64■■□□□ 1.38
LBX1P52954 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LBX1P52954 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LBX1P52954 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC23.64■■□□□ 1.37
LBX1P52954 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LBX1P52954 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms