Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ALDH1A1P00352 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.79■■□□□ 1.4
ALDH1A1P00352 NME3-204ENST00000563498 920 ntTSL 2 BASIC23.79■■□□□ 1.4
ALDH1A1P00352 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC23.79■■□□□ 1.4
ALDH1A1P00352 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC23.79■■□□□ 1.4
ALDH1A1P00352 P4HB-223ENST00000576390 439 ntTSL 4 BASIC23.79■■□□□ 1.4
ALDH1A1P00352 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.79■■□□□ 1.4
ALDH1A1P00352 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ALDH1A1P00352 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ALDH1A1P00352 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ALDH1A1P00352 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.78■■□□□ 1.4
ALDH1A1P00352 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ALDH1A1P00352 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.78■■□□□ 1.4
ALDH1A1P00352 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ALDH1A1P00352 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.78■■□□□ 1.4
ALDH1A1P00352 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
ALDH1A1P00352 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.78■■□□□ 1.4
ALDH1A1P00352 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.78■■□□□ 1.4
ALDH1A1P00352 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.78■■□□□ 1.4
ALDH1A1P00352 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ALDH1A1P00352 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ALDH1A1P00352 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.78■■□□□ 1.4
ALDH1A1P00352 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC23.78■■□□□ 1.4
ALDH1A1P00352 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.78■■□□□ 1.4
ALDH1A1P00352 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ALDH1A1P00352 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ALDH1A1P00352 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ALDH1A1P00352 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
ALDH1A1P00352 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ALDH1A1P00352 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
ALDH1A1P00352 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ALDH1A1P00352 AL353807.1-201ENST00000427475 662 ntBASIC23.77■■□□□ 1.4
ALDH1A1P00352 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.77■■□□□ 1.4
ALDH1A1P00352 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.77■■□□□ 1.4
ALDH1A1P00352 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.77■■□□□ 1.4
ALDH1A1P00352 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.77■■□□□ 1.4
ALDH1A1P00352 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC23.77■■□□□ 1.4
ALDH1A1P00352 MIR6786-201ENST00000616843 113 ntBASIC23.77■■□□□ 1.4
ALDH1A1P00352 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ALDH1A1P00352 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ALDH1A1P00352 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ALDH1A1P00352 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.77■■□□□ 1.4
ALDH1A1P00352 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ALDH1A1P00352 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.77■■□□□ 1.4
ALDH1A1P00352 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.76■■□□□ 1.39
ALDH1A1P00352 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.76■■□□□ 1.39
ALDH1A1P00352 AC116050.2-201ENST00000612102 1779 ntBASIC23.76■■□□□ 1.39
ALDH1A1P00352 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ALDH1A1P00352 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ALDH1A1P00352 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ALDH1A1P00352 CRAT-202ENST00000393384 973 ntTSL 2 BASIC23.76■■□□□ 1.39
ALDH1A1P00352 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ALDH1A1P00352 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.76■■□□□ 1.39
ALDH1A1P00352 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC23.76■■□□□ 1.39
ALDH1A1P00352 AF186192.3-201ENST00000583427 947 ntBASIC23.76■■□□□ 1.39
ALDH1A1P00352 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.76■■□□□ 1.39
ALDH1A1P00352 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.76■■□□□ 1.39
ALDH1A1P00352 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.76■■□□□ 1.39
ALDH1A1P00352 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ALDH1A1P00352 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ALDH1A1P00352 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ALDH1A1P00352 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
ALDH1A1P00352 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.75■■□□□ 1.39
ALDH1A1P00352 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
ALDH1A1P00352 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
ALDH1A1P00352 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.75■■□□□ 1.39
ALDH1A1P00352 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.75■■□□□ 1.39
ALDH1A1P00352 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.75■■□□□ 1.39
ALDH1A1P00352 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.75■■□□□ 1.39
ALDH1A1P00352 AC087633.2-202ENST00000565166 1439 ntBASIC23.75■■□□□ 1.39
ALDH1A1P00352 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ALDH1A1P00352 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ALDH1A1P00352 PGM5P4-201ENST00000421970 445 ntBASIC23.74■■□□□ 1.39
ALDH1A1P00352 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
ALDH1A1P00352 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.74■■□□□ 1.39
ALDH1A1P00352 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.74■■□□□ 1.39
ALDH1A1P00352 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.74■■□□□ 1.39
ALDH1A1P00352 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ALDH1A1P00352 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
ALDH1A1P00352 AC005521.1-201ENST00000393351 872 ntBASIC23.73■■□□□ 1.39
ALDH1A1P00352 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.73■■□□□ 1.39
ALDH1A1P00352 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.73■■□□□ 1.39
ALDH1A1P00352 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC23.73■■□□□ 1.39
ALDH1A1P00352 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.73■■□□□ 1.39
ALDH1A1P00352 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ALDH1A1P00352 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ALDH1A1P00352 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ALDH1A1P00352 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
ALDH1A1P00352 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ALDH1A1P00352 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ALDH1A1P00352 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC23.72■■□□□ 1.39
ALDH1A1P00352 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ALDH1A1P00352 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.72■■□□□ 1.39
ALDH1A1P00352 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
ALDH1A1P00352 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ALDH1A1P00352 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
ALDH1A1P00352 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.71■■□□□ 1.39
ALDH1A1P00352 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
ALDH1A1P00352 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ALDH1A1P00352 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms