Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN11O75508 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN11O75508 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.13■□□□□ 0.97
CLDN11O75508 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.13■□□□□ 0.97
CLDN11O75508 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.13■□□□□ 0.97
CLDN11O75508 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN11O75508 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN11O75508 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CLDN11O75508 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN11O75508 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLDN11O75508 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN11O75508 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN11O75508 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN11O75508 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.12■□□□□ 0.97
CLDN11O75508 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN11O75508 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN11O75508 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN11O75508 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CLDN11O75508 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN11O75508 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CLDN11O75508 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN11O75508 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.12■□□□□ 0.97
CLDN11O75508 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.12■□□□□ 0.97
CLDN11O75508 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.12■□□□□ 0.97
CLDN11O75508 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.12■□□□□ 0.97
CLDN11O75508 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN11O75508 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN11O75508 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN11O75508 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN11O75508 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLDN11O75508 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CLDN11O75508 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN11O75508 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.11■□□□□ 0.97
CLDN11O75508 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.11■□□□□ 0.97
CLDN11O75508 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN11O75508 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN11O75508 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.11■□□□□ 0.97
CLDN11O75508 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN11O75508 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.11■□□□□ 0.97
CLDN11O75508 BX276092.2-201ENST00000417668 665 ntBASIC21.11■□□□□ 0.97
CLDN11O75508 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CLDN11O75508 AL138781.1-201ENST00000566567 1274 ntBASIC21.11■□□□□ 0.97
CLDN11O75508 MIR4758-201ENST00000577688 71 ntBASIC21.11■□□□□ 0.97
CLDN11O75508 CYP2T3P-201ENST00000601990 817 ntBASIC21.11■□□□□ 0.97
CLDN11O75508 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CLDN11O75508 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.11■□□□□ 0.97
CLDN11O75508 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN11O75508 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN11O75508 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLDN11O75508 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLDN11O75508 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN11O75508 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN11O75508 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.1■□□□□ 0.97
CLDN11O75508 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CLDN11O75508 AC121338.2-201ENST00000622535 1744 ntBASIC21.1■□□□□ 0.97
CLDN11O75508 CYP21A1P-202ENST00000354927 1481 ntBASIC21.1■□□□□ 0.97
CLDN11O75508 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN11O75508 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN11O75508 AC073210.2-201ENST00000430369 194 ntBASIC21.1■□□□□ 0.97
CLDN11O75508 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.1■□□□□ 0.97
CLDN11O75508 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.1■□□□□ 0.97
CLDN11O75508 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.1■□□□□ 0.97
CLDN11O75508 AC092118.2-201ENST00000613495 667 ntBASIC21.1■□□□□ 0.97
CLDN11O75508 AF106564.1-201ENST00000607058 2553 ntBASIC21.1■□□□□ 0.97
CLDN11O75508 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.1■□□□□ 0.97
CLDN11O75508 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN11O75508 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN11O75508 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLDN11O75508 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CLDN11O75508 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.09■□□□□ 0.97
CLDN11O75508 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CLDN11O75508 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.09■□□□□ 0.97
CLDN11O75508 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.09■□□□□ 0.97
CLDN11O75508 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLDN11O75508 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CLDN11O75508 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN11O75508 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.08■□□□□ 0.97
CLDN11O75508 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.08■□□□□ 0.97
CLDN11O75508 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN11O75508 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN11O75508 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN11O75508 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLDN11O75508 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.08■□□□□ 0.97
CLDN11O75508 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.08■□□□□ 0.97
CLDN11O75508 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.08■□□□□ 0.97
CLDN11O75508 AC133041.1-202ENST00000642053 222 ntBASIC21.08■□□□□ 0.97
CLDN11O75508 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLDN11O75508 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms