Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.5■■□□□ 1.03
LRCH4O75427 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.5■■□□□ 1.03
LRCH4O75427 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LRCH4O75427 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.5■■□□□ 1.03
LRCH4O75427 AC027702.1-201ENST00000563810 1770 ntBASIC21.5■■□□□ 1.03
LRCH4O75427 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH4O75427 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.5■■□□□ 1.03
LRCH4O75427 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH4O75427 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LRCH4O75427 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LRCH4O75427 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.49■■□□□ 1.03
LRCH4O75427 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.49■■□□□ 1.03
LRCH4O75427 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRCH4O75427 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
LRCH4O75427 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRCH4O75427 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.49■■□□□ 1.03
LRCH4O75427 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
LRCH4O75427 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.49■■□□□ 1.03
LRCH4O75427 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.49■■□□□ 1.03
LRCH4O75427 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.49■■□□□ 1.03
LRCH4O75427 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LRCH4O75427 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRCH4O75427 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRCH4O75427 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.49■■□□□ 1.03
LRCH4O75427 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRCH4O75427 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
LRCH4O75427 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRCH4O75427 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LRCH4O75427 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.48■■□□□ 1.03
LRCH4O75427 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRCH4O75427 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.48■■□□□ 1.03
LRCH4O75427 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.48■■□□□ 1.03
LRCH4O75427 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LRCH4O75427 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRCH4O75427 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRCH4O75427 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LRCH4O75427 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.48■■□□□ 1.03
LRCH4O75427 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LRCH4O75427 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LRCH4O75427 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRCH4O75427 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRCH4O75427 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
LRCH4O75427 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRCH4O75427 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.48■■□□□ 1.03
LRCH4O75427 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
LRCH4O75427 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.47■■□□□ 1.03
LRCH4O75427 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH4O75427 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH4O75427 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
LRCH4O75427 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.47■■□□□ 1.03
LRCH4O75427 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.47■■□□□ 1.03
LRCH4O75427 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.47■■□□□ 1.03
LRCH4O75427 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
LRCH4O75427 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
LRCH4O75427 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.47■■□□□ 1.03
LRCH4O75427 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.47■■□□□ 1.03
LRCH4O75427 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH4O75427 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH4O75427 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.47■■□□□ 1.03
LRCH4O75427 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH4O75427 GABARAPL3-202ENST00000624044 1851 ntBASIC21.47■■□□□ 1.03
LRCH4O75427 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
LRCH4O75427 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.47■■□□□ 1.03
LRCH4O75427 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.47■■□□□ 1.03
LRCH4O75427 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH4O75427 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LRCH4O75427 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.46■■□□□ 1.03
LRCH4O75427 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 AL121603.2-201ENST00000557373 2117 ntBASIC21.46■■□□□ 1.03
LRCH4O75427 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LRCH4O75427 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.46■■□□□ 1.03
LRCH4O75427 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.46■■□□□ 1.03
LRCH4O75427 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.46■■□□□ 1.03
LRCH4O75427 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.46■■□□□ 1.03
LRCH4O75427 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.46■■□□□ 1.03
LRCH4O75427 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.46■■□□□ 1.03
LRCH4O75427 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
LRCH4O75427 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.46■■□□□ 1.03
LRCH4O75427 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LRCH4O75427 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LRCH4O75427 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
LRCH4O75427 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRCH4O75427 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.46■■□□□ 1.03
LRCH4O75427 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
LRCH4O75427 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.45■■□□□ 1.02
LRCH4O75427 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH4O75427 AC073130.3-201ENST00000624389 2278 ntBASIC21.45■■□□□ 1.02
LRCH4O75427 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH4O75427 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms