Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CCDC136-201ENST00000297788 4169 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
P04436 SLC44A2-202ENST00000407327 3301 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 LINC00886-201ENST00000472943 3306 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 HHAT-207ENST00000541565 3164 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 LINC00606-201ENST00000412578 2869 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 TNFRSF11B-201ENST00000297350 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 AC005697.2-201ENST00000581901 2266 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 ADH6-201ENST00000237653 1691 ntAPPRIS P3 TSL 5 BASIC8.75□□□□□ -1.01
P04436 PTPRD-207ENST00000463477 1697 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 TUBA1C-202ENST00000541364 1695 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 TRIO-224ENST00000620511 1547 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 HSFY1-204ENST00000382856 1374 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 PNPT1P1-201ENST00000450418 2315 ntBASIC8.75□□□□□ -1.01
P04436 TUFT1-203ENST00000368849 3111 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 SEMA4G-205ENST00000517724 2675 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 TIAM2-210ENST00000528391 3349 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 RARRES3-201ENST00000255688 749 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 ATOX1-201ENST00000313115 488 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 HIST1H2BI-201ENST00000377733 381 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
P04436 FAM236D-201ENST00000419795 433 ntAPPRIS P5 TSL 5 BASIC8.75□□□□□ -1.01
P04436 SEMA3B-AS1-201ENST00000421735 338 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 AC084809.1-201ENST00000435733 591 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 RPSAP27-201ENST00000442177 850 ntBASIC8.75□□□□□ -1.01
P04436 AC130689.1-201ENST00000451056 408 ntBASIC8.75□□□□□ -1.01
P04436 AC000067.1-201ENST00000452326 287 ntTSL 3 BASIC8.75□□□□□ -1.01
P04436 FAM236D-202ENST00000458170 451 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
P04436 LINC00881-202ENST00000471719 791 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 UQCRBP3-201ENST00000509483 312 ntBASIC8.75□□□□□ -1.01
P04436 AC064862.6-201ENST00000511350 459 ntBASIC8.75□□□□□ -1.01
P04436 OR9G3P-201ENST00000525553 918 ntBASIC8.75□□□□□ -1.01
P04436 INTS4-205ENST00000527522 956 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 TMEM107-209ENST00000533070 726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 IL22-202ENST00000538666 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 MEG8-208ENST00000553465 1176 ntTSL 5 BASIC8.75□□□□□ -1.01
P04436 EARS2-207ENST00000563459 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 AF038458.3-201ENST00000592518 500 ntTSL 3 BASIC8.75□□□□□ -1.01
P04436 DPPA5P1-201ENST00000600430 340 ntBASIC8.75□□□□□ -1.01
P04436 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 U62317.5-201ENST00000609268 362 ntBASIC8.75□□□□□ -1.01
P04436 AC127381.3-201ENST00000622901 303 ntBASIC8.75□□□□□ -1.01
P04436 FAM236C-202ENST00000636532 451 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
P04436 ZNF132-203ENST00000639285 1200 ntTSL 5 BASIC8.75□□□□□ -1.01
P04436 TRIO-225ENST00000639876 769 ntTSL 5 BASIC8.75□□□□□ -1.01
P04436 ZNF700-201ENST00000254321 2882 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 TJAP1-215ENST00000612912 4312 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 PDSS2-202ENST00000369037 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 HHAT-202ENST00000367009 2714 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 LRRFIP2-203ENST00000396428 1791 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 GRSF1-203ENST00000502323 1794 ntTSL 5 BASIC8.75□□□□□ -1.01
P04436 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 SEC61A2-204ENST00000379020 2252 ntTSL 5 BASIC8.75□□□□□ -1.01
P04436 PAN2-203ENST00000440411 4576 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 ANTXRLP1-201ENST00000604933 1829 ntBASIC8.75□□□□□ -1.01
P04436 SAMMSON-218ENST00000641601 1847 ntBASIC8.75□□□□□ -1.01
P04436 ZNF585A-203ENST00000392157 3190 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 HPS5-206ENST00000531848 2160 ntTSL 5 BASIC8.75□□□□□ -1.01
P04436 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 NONO-215ENST00000535149 2882 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 CYP4F35P-201ENST00000582957 2876 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 EML1-202ENST00000327921 3715 ntTSL 2 BASIC8.75□□□□□ -1.01
P04436 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
P04436 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC8.75□□□□□ -1.01
P04436 HDAC9-229ENST00000622668 4279 ntTSL 2 BASIC8.74□□□□□ -1.01
P04436 CPVL-203ENST00000409850 2213 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
P04436 IL22RA2-202ENST00000339602 2620 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 ASH2LP2-201ENST00000453999 1561 ntBASIC8.74□□□□□ -1.01
P04436 AC026358.1-201ENST00000539391 2256 ntTSL 3 BASIC8.74□□□□□ -1.01
P04436 SLC12A3-203ENST00000563236 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC8.74□□□□□ -1.01
P04436 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC8.74□□□□□ -1.01
P04436 ZNF232-208ENST00000575898 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 AL596202.1-201ENST00000435295 3088 ntTSL 2 BASIC8.74□□□□□ -1.01
P04436 OR10G6-201ENST00000307002 999 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
P04436 MRPL55-204ENST00000348259 661 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
P04436 CALCA-202ENST00000361010 916 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
P04436 RNA5SP379-201ENST00000364599 113 ntBASIC8.74□□□□□ -1.01
P04436 TPM3P2-201ENST00000397772 723 ntBASIC8.74□□□□□ -1.01
P04436 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 RN7SKP7-201ENST00000410540 285 ntBASIC8.74□□□□□ -1.01
P04436 AL353705.3-201ENST00000418694 1250 ntBASIC8.74□□□□□ -1.01
P04436 OR8B1P-201ENST00000419328 918 ntBASIC8.74□□□□□ -1.01
P04436 RPL29P28-201ENST00000421928 472 ntBASIC8.74□□□□□ -1.01
P04436 RPSAP28-201ENST00000437188 874 ntBASIC8.74□□□□□ -1.01
P04436 AC092042.3-203ENST00000443313 950 ntTSL 2 BASIC8.74□□□□□ -1.01
P04436 LINC02213-201ENST00000504650 518 ntTSL 3 BASIC8.74□□□□□ -1.01
P04436 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC8.74□□□□□ -1.01
P04436 LINC02548-201ENST00000531749 484 ntTSL 3 BASIC8.74□□□□□ -1.01
P04436 AC009108.2-201ENST00000566485 269 ntTSL 5 BASIC8.74□□□□□ -1.01
P04436 RN7SL531P-201ENST00000578464 282 ntBASIC8.74□□□□□ -1.01
P04436 BRCA1-226ENST00000591534 1282 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
P04436 CEACAM8-202ENST00000599005 544 ntTSL 5 BASIC8.74□□□□□ -1.01
P04436 AL591926.7-201ENST00000614301 211 ntBASIC8.74□□□□□ -1.01
P04436 CTBP1-219ENST00000629223 210 ntTSL 5 BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms