RNA–Protein interactions for RNA: ENST00000541364.5

TUBA1C-202, Transcript of tubulin alpha 1c, humanhuman

TSL 2 BASIC

Gene TUBA1C, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-202ENST00000541364 NISCHQ9Y2I1 1504 aa21.99■■□□□ 1.11
TUBA1C-202ENST00000541364 CCDC180Q9P1Z9 1646 aa19.28■□□□□ 0.68
TUBA1C-202ENST00000541364 ABCC9O60706 1549 aa18.88■□□□□ 0.61
TUBA1C-202ENST00000541364 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
TUBA1C-202ENST00000541364 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
TUBA1C-202ENST00000541364 NACADO15069 1562 aa18.1■□□□□ 0.49
TUBA1C-202ENST00000541364 RB1CC1Q8TDY2 1594 aa18.08■□□□□ 0.48
TUBA1C-202ENST00000541364 DCAF1Q9Y4B6 1507 aa18.05■□□□□ 0.48
TUBA1C-202ENST00000541364 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
TUBA1C-202ENST00000541364 SHROOM4Q9ULL8 1493 aa17.87■□□□□ 0.45
TUBA1C-202ENST00000541364 SCRIBQ14160 1630 aa17.86■□□□□ 0.45
TUBA1C-202ENST00000541364 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
TUBA1C-202ENST00000541364 UNC13AQ9UPW8 1703 aa17.73■□□□□ 0.43
TUBA1C-202ENST00000541364 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
TUBA1C-202ENST00000541364 BICRAQ9NZM4 1560 aa17.6■□□□□ 0.41
TUBA1C-202ENST00000541364 SUPT5HO00267 1087 aaKnown RBP17.26■□□□□ 0.35
TUBA1C-202ENST00000541364 CECR2Q9BXF3 1484 aa17.23■□□□□ 0.35
TUBA1C-202ENST00000541364 EIF4G1Q04637 1599 aaKnown RBP17.1■□□□□ 0.33
TUBA1C-202ENST00000541364 HRCP23327 699 aa17.08■□□□□ 0.32
TUBA1C-202ENST00000541364 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
TUBA1C-202ENST00000541364 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
TUBA1C-202ENST00000541364 SMARCA4P51532 1647 aa17■□□□□ 0.31
TUBA1C-202ENST00000541364 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
TUBA1C-202ENST00000541364 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
TUBA1C-202ENST00000541364 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.31
TUBA1C-202ENST00000541364 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
TUBA1C-202ENST00000541364 WIZO95785 1651 aa16.88■□□□□ 0.29
TUBA1C-202ENST00000541364 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
TUBA1C-202ENST00000541364 SMARCA2P51531 1590 aa16.77■□□□□ 0.27
TUBA1C-202ENST00000541364 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
TUBA1C-202ENST00000541364 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
TUBA1C-202ENST00000541364 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
TUBA1C-202ENST00000541364 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
TUBA1C-202ENST00000541364 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
TUBA1C-202ENST00000541364 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
TUBA1C-202ENST00000541364 DNAJC5Q9H3Z4 198 aa16.54■□□□□ 0.24
TUBA1C-202ENST00000541364 TRIM26Q12899 539 aaPredicted RBP16.53■□□□□ 0.24
TUBA1C-202ENST00000541364 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
TUBA1C-202ENST00000541364 ZEB1P37275 1124 aaPredicted RBP16.46■□□□□ 0.23
TUBA1C-202ENST00000541364 NESP48681 1621 aa16.44■□□□□ 0.22
TUBA1C-202ENST00000541364 LOC105371045A0A1W2PR82 267 aa16.4■□□□□ 0.22
TUBA1C-202ENST00000541364 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
TUBA1C-202ENST00000541364 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
TUBA1C-202ENST00000541364 POTEDQ86YR6 584 aa16.32■□□□□ 0.2
TUBA1C-202ENST00000541364 CFTRP13569 1480 aa16.25■□□□□ 0.19
TUBA1C-202ENST00000541364 LAMC3Q9Y6N6 1575 aa16.22■□□□□ 0.19
TUBA1C-202ENST00000541364 PELP1Q8IZL8 1130 aaKnown RBP16.22■□□□□ 0.19
TUBA1C-202ENST00000541364 ERCC6Q03468 1493 aa16.19■□□□□ 0.18
TUBA1C-202ENST00000541364 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
TUBA1C-202ENST00000541364 CUX2O14529 1486 aa16.18■□□□□ 0.18
TUBA1C-202ENST00000541364 FANCD2Q9BXW9 1451 aa16.17■□□□□ 0.18
TUBA1C-202ENST00000541364 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
TUBA1C-202ENST00000541364 KIF21AQ7Z4S6 1674 aa16.15■□□□□ 0.18
TUBA1C-202ENST00000541364 CEP164Q9UPV0 1460 aa16.09■□□□□ 0.17
TUBA1C-202ENST00000541364 ABCC8Q09428 1581 aa16.07■□□□□ 0.16
TUBA1C-202ENST00000541364 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
TUBA1C-202ENST00000541364 URB2Q14146 1524 aaKnown RBP16.01■□□□□ 0.15
TUBA1C-202ENST00000541364 MYT1Q01538 1121 aa15.99■□□□□ 0.15
TUBA1C-202ENST00000541364 MRC2Q9UBG0 1479 aa15.98■□□□□ 0.15
TUBA1C-202ENST00000541364 THOC2Q8NI27 1593 aaKnown RBP15.97■□□□□ 0.15
TUBA1C-202ENST00000541364 CUX1P39880 1505 aa15.95■□□□□ 0.14
TUBA1C-202ENST00000541364 WRNQ14191 1432 aaPredicted RBP eCLIP15.94■□□□□ 0.146e-8■■□□□ 13.6
TUBA1C-202ENST00000541364 TOPBP1Q92547 1522 aa15.93■□□□□ 0.14
TUBA1C-202ENST00000541364 SYNJ1O43426 1573 aa15.91■□□□□ 0.14
TUBA1C-202ENST00000541364 WDR62O43379 1518 aa15.88■□□□□ 0.13
TUBA1C-202ENST00000541364 DNMBPQ6XZF7 1577 aa15.88■□□□□ 0.13
TUBA1C-202ENST00000541364 FAM9AQ8IZU1 332 aaPredicted RBP15.86■□□□□ 0.13
TUBA1C-202ENST00000541364 RAD54L2Q9Y4B4 1467 aa15.85■□□□□ 0.13
TUBA1C-202ENST00000541364 FGD5Q6ZNL6 1462 aa15.84■□□□□ 0.13
TUBA1C-202ENST00000541364 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
TUBA1C-202ENST00000541364 TOP2BQ02880 1626 aa15.81■□□□□ 0.12
TUBA1C-202ENST00000541364 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
TUBA1C-202ENST00000541364 SOGA1O94964 1423 aa15.79■□□□□ 0.12
TUBA1C-202ENST00000541364 BIVM-ERCC5R4GMW8 1640 aa15.78■□□□□ 0.12
TUBA1C-202ENST00000541364 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
TUBA1C-202ENST00000541364 ZNF608Q9ULD9 1512 aaPredicted RBP15.74■□□□□ 0.11
TUBA1C-202ENST00000541364 EEA1Q15075 1411 aa15.73■□□□□ 0.11
TUBA1C-202ENST00000541364 AQRO60306 1485 aaKnown RBP eCLIP15.71■□□□□ 0.16e-11■■■□□ 19.2
TUBA1C-202ENST00000541364 IFT140Q96RY7 1462 aa15.7■□□□□ 0.1
TUBA1C-202ENST00000541364 CCER1Q8TC90 406 aaPredicted RBP15.7■□□□□ 0.1
TUBA1C-202ENST00000541364 TARBP1Q13395 1621 aaKnown RBP15.7■□□□□ 0.1
TUBA1C-202ENST00000541364 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
TUBA1C-202ENST00000541364 RUSC2Q8N2Y8 1516 aa15.67■□□□□ 0.1
TUBA1C-202ENST00000541364 CENPBP07199 599 aaPredicted RBP15.65■□□□□ 0.1
TUBA1C-202ENST00000541364 TNIKQ9UKE5 1360 aa15.65■□□□□ 0.1
TUBA1C-202ENST00000541364 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
TUBA1C-202ENST00000541364 EHMT2Q96KQ7 1210 aa15.63■□□□□ 0.09
TUBA1C-202ENST00000541364 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
TUBA1C-202ENST00000541364 CEP162Q5TB80 1403 aa15.6■□□□□ 0.09
TUBA1C-202ENST00000541364 WDR97A6NE52 1622 aa15.6■□□□□ 0.09
TUBA1C-202ENST00000541364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
TUBA1C-202ENST00000541364 GAPVD1Q14C86 1478 aa15.58■□□□□ 0.08
TUBA1C-202ENST00000541364 DIEXFQ68CQ4 756 aaKnown RBP15.57■□□□□ 0.08
TUBA1C-202ENST00000541364 FBLN2P98095 1184 aa15.56■□□□□ 0.08
TUBA1C-202ENST00000541364 KIF27Q86VH2 1401 aa15.56■□□□□ 0.08
TUBA1C-202ENST00000541364 ABCA5Q8WWZ7 1642 aa15.54■□□□□ 0.08
TUBA1C-202ENST00000541364 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.07
TUBA1C-202ENST00000541364 GOLGA3Q08378 1498 aa15.51■□□□□ 0.07
TUBA1C-202ENST00000541364 IGF1RP08069 1367 aa15.51■□□□□ 0.07
TUBA1C-202ENST00000541364 NEUROD1Q13562 356 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms