Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 AC006058.3-201ENST00000606217 1069 ntBASIC20.36■□□□□ 0.85
HS3ST3A1Q9Y663 AC105020.6-201ENST00000621523 1217 ntBASIC20.36■□□□□ 0.85
HS3ST3A1Q9Y663 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.36■□□□□ 0.85
HS3ST3A1Q9Y663 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HS3ST3A1Q9Y663 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
HS3ST3A1Q9Y663 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HS3ST3A1Q9Y663 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 AC128676.1-201ENST00000454392 318 ntBASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HS3ST3A1Q9Y663 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.34■□□□□ 0.85
HS3ST3A1Q9Y663 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
HS3ST3A1Q9Y663 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
HS3ST3A1Q9Y663 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HS3ST3A1Q9Y663 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HS3ST3A1Q9Y663 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HS3ST3A1Q9Y663 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.33■□□□□ 0.85
HS3ST3A1Q9Y663 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HS3ST3A1Q9Y663 PGM5P4-201ENST00000421970 445 ntBASIC20.33■□□□□ 0.85
HS3ST3A1Q9Y663 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.33■□□□□ 0.85
HS3ST3A1Q9Y663 PNMA6B-201ENST00000538162 1200 ntBASIC20.33■□□□□ 0.85
HS3ST3A1Q9Y663 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.33■□□□□ 0.85
HS3ST3A1Q9Y663 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HS3ST3A1Q9Y663 AC087633.2-202ENST00000565166 1439 ntBASIC20.33■□□□□ 0.84
HS3ST3A1Q9Y663 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HS3ST3A1Q9Y663 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HS3ST3A1Q9Y663 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HS3ST3A1Q9Y663 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HS3ST3A1Q9Y663 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 AC008403.3-201ENST00000598924 454 ntBASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HS3ST3A1Q9Y663 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 AC092368.3-202ENST00000574180 1591 ntBASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 UNC93B4-201ENST00000505679 747 ntBASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HS3ST3A1Q9Y663 AC244015.2-201ENST00000616358 1861 ntBASIC20.3■□□□□ 0.84
HS3ST3A1Q9Y663 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HS3ST3A1Q9Y663 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HS3ST3A1Q9Y663 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.3■□□□□ 0.84
HS3ST3A1Q9Y663 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HS3ST3A1Q9Y663 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.3■□□□□ 0.84
HS3ST3A1Q9Y663 GCSHP5-201ENST00000443090 522 ntBASIC20.3■□□□□ 0.84
HS3ST3A1Q9Y663 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HS3ST3A1Q9Y663 AC098590.1-201ENST00000468126 897 ntBASIC20.3■□□□□ 0.84
HS3ST3A1Q9Y663 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HS3ST3A1Q9Y663 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms