Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZFYVE28Q9HCC9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.84■■□□□ 1.41
ZFYVE28Q9HCC9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZFYVE28Q9HCC9 RARRES2P10-201ENST00000564312 460 ntBASIC23.84■■□□□ 1.41
ZFYVE28Q9HCC9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZFYVE28Q9HCC9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZFYVE28Q9HCC9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.83■■□□□ 1.41
ZFYVE28Q9HCC9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
ZFYVE28Q9HCC9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ZFYVE28Q9HCC9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.83■■□□□ 1.41
ZFYVE28Q9HCC9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
ZFYVE28Q9HCC9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
ZFYVE28Q9HCC9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.83■■□□□ 1.41
ZFYVE28Q9HCC9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 TMPOP1-202ENST00000424642 1267 ntBASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 CD177P1-201ENST00000606252 935 ntBASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZFYVE28Q9HCC9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.81■■□□□ 1.4
ZFYVE28Q9HCC9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZFYVE28Q9HCC9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.8■■□□□ 1.4
ZFYVE28Q9HCC9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZFYVE28Q9HCC9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZFYVE28Q9HCC9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.8■■□□□ 1.4
ZFYVE28Q9HCC9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.8■■□□□ 1.4
ZFYVE28Q9HCC9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
ZFYVE28Q9HCC9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.8■■□□□ 1.4
ZFYVE28Q9HCC9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZFYVE28Q9HCC9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 AC092053.2-201ENST00000640557 1818 ntBASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZFYVE28Q9HCC9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 AC005829.2-201ENST00000571422 1056 ntBASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 AC006557.6-201ENST00000623071 864 ntBASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZFYVE28Q9HCC9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 KRT18P35-201ENST00000510488 1269 ntBASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ZFYVE28Q9HCC9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ZFYVE28Q9HCC9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms