Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ZNF556Q9HAH1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ZNF556Q9HAH1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ZNF556Q9HAH1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ZNF556Q9HAH1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
ZNF556Q9HAH1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 AC136469.2-201ENST00000623944 1028 ntBASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.09■□□□□ 0.65
ZNF556Q9HAH1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF556Q9HAH1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ZNF556Q9HAH1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ZNF556Q9HAH1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ZNF556Q9HAH1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF556Q9HAH1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.08■□□□□ 0.65
ZNF556Q9HAH1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.08■□□□□ 0.65
ZNF556Q9HAH1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF556Q9HAH1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.08■□□□□ 0.65
ZNF556Q9HAH1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.08■□□□□ 0.65
ZNF556Q9HAH1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ZNF556Q9HAH1 SLC47A1P1-202ENST00000449666 945 ntBASIC19.08■□□□□ 0.64
ZNF556Q9HAH1 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.08■□□□□ 0.64
ZNF556Q9HAH1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.08■□□□□ 0.64
ZNF556Q9HAH1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF556Q9HAH1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF556Q9HAH1 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.08■□□□□ 0.64
ZNF556Q9HAH1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ZNF556Q9HAH1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.08■□□□□ 0.64
ZNF556Q9HAH1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.08■□□□□ 0.64
ZNF556Q9HAH1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.08■□□□□ 0.64
ZNF556Q9HAH1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.08■□□□□ 0.64
ZNF556Q9HAH1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 SERBP1P1-201ENST00000396021 1160 ntBASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.07■□□□□ 0.64
ZNF556Q9HAH1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ZNF556Q9HAH1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 AC011298.3-201ENST00000615796 283 ntBASIC19.05■□□□□ 0.64
ZNF556Q9HAH1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms