Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRFN3Q9BTN0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 MYC-208ENST00000641036 567 ntBASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRFN3Q9BTN0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 AP000347.1-202ENST00000435868 847 ntBASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 CLEC4GP1-201ENST00000596555 870 ntBASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRFN3Q9BTN0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 AC005829.2-201ENST00000571422 1056 ntBASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 AC023511.2-201ENST00000618803 211 ntBASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRFN3Q9BTN0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRFN3Q9BTN0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRFN3Q9BTN0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRFN3Q9BTN0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.89■□□□□ 0.93
LRFN3Q9BTN0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRFN3Q9BTN0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRFN3Q9BTN0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.89■□□□□ 0.93
LRFN3Q9BTN0 KRT16P5-201ENST00000455284 522 ntBASIC20.89■□□□□ 0.93
LRFN3Q9BTN0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRFN3Q9BTN0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRFN3Q9BTN0 AC093458.2-201ENST00000623150 629 ntBASIC20.89■□□□□ 0.93
LRFN3Q9BTN0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRFN3Q9BTN0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.89■□□□□ 0.93
LRFN3Q9BTN0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 PVRIG2P-201ENST00000435460 978 ntBASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRFN3Q9BTN0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRFN3Q9BTN0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms