Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.58■□□□□ 0.88
TRIM42Q8IWZ5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM42Q8IWZ5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.58■□□□□ 0.88
TRIM42Q8IWZ5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM42Q8IWZ5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRIM42Q8IWZ5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.58■□□□□ 0.88
TRIM42Q8IWZ5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRIM42Q8IWZ5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM42Q8IWZ5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 AFG3L1P-217ENST00000557444 2447 ntBASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 AL162377.1-201ENST00000618844 1793 ntBASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM42Q8IWZ5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM42Q8IWZ5 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.55■□□□□ 0.88
TRIM42Q8IWZ5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM42Q8IWZ5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM42Q8IWZ5 SRD5A1P1-201ENST00000442297 786 ntBASIC20.55■□□□□ 0.88
TRIM42Q8IWZ5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM42Q8IWZ5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TRIM42Q8IWZ5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM42Q8IWZ5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM42Q8IWZ5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM42Q8IWZ5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM42Q8IWZ5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM42Q8IWZ5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM42Q8IWZ5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 AL138724.1-201ENST00000606771 1088 ntBASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM42Q8IWZ5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms