Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.112e-6■■■□□ 17.5
SND1Q7KZF4 AKR1A1-205ENST00000473038 948 ntTSL 215.48■□□□□ 0.072e-6■■■□□ 17.5
SND1Q7KZF4 AKR1A1-213ENST00000497973 667 ntTSL 212.5□□□□□ -0.412e-6■■■□□ 17.5
SND1Q7KZF4 AKR1A1-211ENST00000495913 421 ntTSL 310.7□□□□□ -0.72e-6■■■□□ 17.5
SND1Q7KZF4 AKR1A1-210ENST00000487654 552 ntTSL 27.25□□□□□ -1.252e-6■■■□□ 17.5
SND1Q7KZF4 SCPEP1-210ENST00000573239 930 ntTSL 215.66■□□□□ 0.11e-6■■■□□ 17.5
SND1Q7KZF4 SCPEP1-202ENST00000570479 924 ntTSL 213.27□□□□□ -0.291e-6■■■□□ 17.5
SND1Q7KZF4 SLC3A2-221ENST00000544377 589 ntTSL 417.23■□□□□ 0.352e-16■■■□□ 17.5
SND1Q7KZF4 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC13.98□□□□□ -0.172e-6■■■□□ 17.5
SND1Q7KZF4 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC13.64□□□□□ -0.232e-6■■■□□ 17.5
SND1Q7KZF4 FN1-206ENST00000359671 8524 ntTSL 5 BASIC13.38□□□□□ -0.272e-6■■■□□ 17.5
SND1Q7KZF4 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC13.06□□□□□ -0.322e-6■■■□□ 17.5
SND1Q7KZF4 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC12.56□□□□□ -0.42e-6■■■□□ 17.5
SND1Q7KZF4 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC12.48□□□□□ -0.412e-6■■■□□ 17.5
SND1Q7KZF4 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC12.37□□□□□ -0.432e-6■■■□□ 17.5
SND1Q7KZF4 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC12.25□□□□□ -0.452e-6■■■□□ 17.5
SND1Q7KZF4 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.492e-6■■■□□ 17.5
SND1Q7KZF4 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC11.11□□□□□ -0.632e-6■■■□□ 17.5
SND1Q7KZF4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.84e-7■■■□□ 17.5
SND1Q7KZF4 HSPG2-208ENST00000471322 1602 ntTSL 518.25■□□□□ 0.511e-7■■■□□ 17.5
SND1Q7KZF4 ANPEP-201ENST00000300060 3678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.492e-8■■■□□ 17.5
SND1Q7KZF4 COL4A5-205ENST00000483338 3622 ntTSL 1 (best)8.74□□□□□ -1.012e-6■■■□□ 17.5
SND1Q7KZF4 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.012e-7■■■□□ 17.5
SND1Q7KZF4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.62e-7■■■□□ 17.5
SND1Q7KZF4 SND1-203ENST00000463020 793 ntTSL 216.2■□□□□ 0.182e-36■■■□□ 17.5
SND1Q7KZF4 ERGIC3-218ENST00000489071 582 ntTSL 28.85□□□□□ -0.993e-8■■■□□ 17.5
SND1Q7KZF4 SLC2A1-202ENST00000415851 578 ntTSL 219.44■□□□□ 0.77e-15■■■□□ 17.5
SND1Q7KZF4 SEC61A1-201ENST00000243253 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.293e-10■■■□□ 17.5
SND1Q7KZF4 SEC61A1-203ENST00000464451 1871 ntTSL 2 BASIC13.05□□□□□ -0.323e-10■■■□□ 17.5
SND1Q7KZF4 SEC61A1-202ENST00000424880 3238 ntTSL 2 BASIC12.76□□□□□ -0.373e-10■■■□□ 17.5
SND1Q7KZF4 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.141e-6■■■□□ 17.5
SND1Q7KZF4 EMP2-202ENST00000359543 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.611e-6■■■□□ 17.5
SND1Q7KZF4 SLC19A1-204ENST00000427839 648 ntTSL 318.26■□□□□ 0.513e-12■■■□□ 17.5
SND1Q7KZF4 SLC19A1-205ENST00000443742 777 ntTSL 316.15■□□□□ 0.183e-12■■■□□ 17.5
SND1Q7KZF4 HSD17B11-205ENST00000508413 563 ntTSL 58.03□□□□□ -1.121e-10■■■□□ 17.5
SND1Q7KZF4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.482e-6■■■□□ 17.5
SND1Q7KZF4 RNASEH2A-204ENST00000593017 1487 ntTSL 216.72■□□□□ 0.272e-6■■■□□ 17.5
SND1Q7KZF4 WFS1-201ENST00000226760 3640 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.36e-8■■■□□ 17.5
SND1Q7KZF4 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.386e-8■■■□□ 17.5
SND1Q7KZF4 WFS1-205ENST00000507765 3655 ntTSL 210.35□□□□□ -0.756e-8■■■□□ 17.5
SND1Q7KZF4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.77■□□□□ 0.62e-8■■■□□ 17.5
SND1Q7KZF4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.442e-8■■■□□ 17.5
SND1Q7KZF4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.132e-8■■■□□ 17.5
SND1Q7KZF4 CRELD1-204ENST00000414117 723 ntTSL 515.6■□□□□ 0.092e-8■■■□□ 17.5
SND1Q7KZF4 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.082e-8■■■□□ 17.5
SND1Q7KZF4 CRELD1-210ENST00000489674 437 ntTSL 513.15□□□□□ -0.32e-8■■■□□ 17.5
SND1Q7KZF4 CRELD1-208ENST00000467713 540 ntTSL 212.47□□□□□ -0.412e-8■■■□□ 17.5
SND1Q7KZF4 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC10.7□□□□□ -0.73e-20■■■□□ 17.5
SND1Q7KZF4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.633e-20■■■□□ 17.5
SND1Q7KZF4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.551e-6■■■□□ 17.5
SND1Q7KZF4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.861e-6■■■□□ 17.5
SND1Q7KZF4 F10-207ENST00000498455 849 ntTSL 214.96□□□□□ -0.012e-8■■■□□ 17.5
SND1Q7KZF4 YIPF5-202ENST00000448443 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.562e-6■■■□□ 17.5
SND1Q7KZF4 YIPF5-204ENST00000513112 2135 ntTSL 1 (best) BASIC11.5□□□□□ -0.572e-6■■■□□ 17.5
SND1Q7KZF4 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.862e-6■■■□□ 17.5
SND1Q7KZF4 YIPF5-205ENST00000519064 684 ntTSL 26.88□□□□□ -1.312e-6■■■□□ 17.5
SND1Q7KZF4 ASPH-219ENST00000521909 851 ntTSL 38.85□□□□□ -0.997e-7■■■□□ 17.5
SND1Q7KZF4 ERGIC3-209ENST00000447986 1632 ntTSL 1 (best)13.63□□□□□ -0.233e-8■■■□□ 17.5
SND1Q7KZF4 ERGIC3-211ENST00000461043 728 ntTSL 212.55□□□□□ -0.43e-8■■■□□ 17.5
SND1Q7KZF4 OSMR-205ENST00000513831 766 ntTSL 310.8□□□□□ -0.684e-8■■■□□ 17.5
SND1Q7KZF4 HEXA-208ENST00000567027 1353 ntTSL 214.15□□□□□ -0.141e-7■■■□□ 17.4
SND1Q7KZF4 HEXA-209ENST00000567159 1582 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41e-7■■■□□ 17.4
SND1Q7KZF4 HEXA-213ENST00000568777 6909 ntTSL 59.25□□□□□ -0.931e-7■■■□□ 17.4
SND1Q7KZF4 CFH-203ENST00000466229 6985 ntTSL 1 (best)5.07□□□□□ -1.65e-7■■■□□ 17.4
SND1Q7KZF4 PROC-204ENST00000419985 500 ntTSL 422.78■■□□□ 1.241e-14■■■□□ 17.4
SND1Q7KZF4 PROC-206ENST00000429925 581 ntTSL 314.91□□□□□ -0.021e-14■■■□□ 17.4
SND1Q7KZF4 DPP4-206ENST00000468903 582 ntTSL 46.96□□□□□ -1.32e-6■■■□□ 17.4
SND1Q7KZF4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.812e-6■■■□□ 17.4
SND1Q7KZF4 GPS1-210ENST00000580141 924 ntTSL 516.14■□□□□ 0.175e-12■■■□□ 17.4
SND1Q7KZF4 ELMOD2-203ENST00000502397 738 ntTSL 514.53□□□□□ -0.085e-12■■■□□ 17.4
SND1Q7KZF4 HSPG2-212ENST00000493940 584 ntTSL 512.93□□□□□ -0.342e-6■■■□□ 17.4
SND1Q7KZF4 ELMOD2-208ENST00000513606 535 ntTSL 46.09□□□□□ -1.435e-12■■■□□ 17.4
SND1Q7KZF4 ASGR1-203ENST00000570576 627 ntTSL 514.02□□□□□ -0.171e-15■■■□□ 17.4
SND1Q7KZF4 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.292e-9■■■□□ 17.4
SND1Q7KZF4 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.052e-6■■■□□ 17.4
SND1Q7KZF4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.9□□□□□ -1.312e-6■■■□□ 17.4
SND1Q7KZF4 ALCAM-203ENST00000465413 2496 ntTSL 26.28□□□□□ -1.42e-6■■■□□ 17.4
SND1Q7KZF4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.77□□□□□ -1.482e-6■■■□□ 17.4
SND1Q7KZF4 SEMA7A-205ENST00000569617 473 ntTSL 312.28□□□□□ -0.446e-11■■■□□ 17.4
SND1Q7KZF4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.492e-7■■■□□ 17.4
SND1Q7KZF4 CD63-205ENST00000548117 499 ntTSL 212.12□□□□□ -0.475e-24■■■□□ 17.4
SND1Q7KZF4 PRDX1-206ENST00000483583 530 ntTSL 223.18■■□□□ 1.39e-13■■■□□ 17.4
SND1Q7KZF4 ITIH2-205ENST00000477751 591 ntTSL 25.59□□□□□ -1.511e-323■■■□□ 17.4
SND1Q7KZF4 GUSB-208ENST00000465785 625 ntTSL 215.78■□□□□ 0.122e-11■■■□□ 17.4
SND1Q7KZF4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.052e-23■■■□□ 17.4
SND1Q7KZF4 HSPD1-201ENST00000345042 2299 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.352e-23■■■□□ 17.4
SND1Q7KZF4 HSPD1-214ENST00000491249 860 ntTSL 29.67□□□□□ -0.862e-23■■■□□ 17.4
SND1Q7KZF4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.29■□□□□ 0.684e-17■■■□□ 17.4
SND1Q7KZF4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.29■□□□□ 0.684e-17■■■□□ 17.4
SND1Q7KZF4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.624e-17■■■□□ 17.4
SND1Q7KZF4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.49■□□□□ 0.554e-17■■■□□ 17.4
SND1Q7KZF4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.264e-17■■■□□ 17.4
SND1Q7KZF4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.064e-17■■■□□ 17.4
SND1Q7KZF4 PCMT1-209ENST00000494411 600 ntTSL 419.74■□□□□ 0.751e-9■■■□□ 17.4
SND1Q7KZF4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.22■□□□□ 0.992e-16■■■□□ 17.4
SND1Q7KZF4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.27■□□□□ 0.522e-16■■■□□ 17.4
SND1Q7KZF4 ASGR1-207ENST00000574330 887 ntTSL 516.82■□□□□ 0.282e-16■■■□□ 17.4
SND1Q7KZF4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -02e-16■■■□□ 17.4
SND1Q7KZF4 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC14.22□□□□□ -0.132e-16■■■□□ 17.4
SND1Q7KZF4 MAN1B1-216ENST00000550113 774 ntTSL 318.13■□□□□ 0.496e-8■■■□□ 17.4
Retrieved 100 of 13,567 protein–RNA pairs in 81.4 ms