RNA–Protein interactions for RNA: ENST00000486979.6

ALCAM-207, Transcript of activated leukocyte cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene ALCAM, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-207ENST00000486979 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
ALCAM-207ENST00000486979 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
ALCAM-207ENST00000486979 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
ALCAM-207ENST00000486979 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
ALCAM-207ENST00000486979 FOXD1Q16676 465 aa19.37■□□□□ 0.69
ALCAM-207ENST00000486979 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
ALCAM-207ENST00000486979 PPP6R1Q9UPN7 881 aa18.32■□□□□ 0.52
ALCAM-207ENST00000486979 ADRA2BP18089 450 aa18.31■□□□□ 0.52
ALCAM-207ENST00000486979 PIAS4Q8N2W9 510 aaPredicted RBP18.22■□□□□ 0.51
ALCAM-207ENST00000486979 MSH5O43196 834 aa18.09■□□□□ 0.49
ALCAM-207ENST00000486979 POTEDQ86YR6 584 aa17.04■□□□□ 0.32
ALCAM-207ENST00000486979 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
ALCAM-207ENST00000486979 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
ALCAM-207ENST00000486979 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
ALCAM-207ENST00000486979 DMRT2Q9Y5R5 561 aa16.6■□□□□ 0.25
ALCAM-207ENST00000486979 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.21
ALCAM-207ENST00000486979 NCBP3Q53F19 620 aaKnown RBP16.23■□□□□ 0.19
ALCAM-207ENST00000486979 HOXD11P31277 338 aaPredicted RBP16.11■□□□□ 0.17
ALCAM-207ENST00000486979 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
ALCAM-207ENST00000486979 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
ALCAM-207ENST00000486979 NPM3O75607 178 aaKnown RBP15.89■□□□□ 0.13
ALCAM-207ENST00000486979 KCNA4P22459 653 aa15.85■□□□□ 0.13
ALCAM-207ENST00000486979 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
ALCAM-207ENST00000486979 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
ALCAM-207ENST00000486979 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.39■□□□□ 0.05
ALCAM-207ENST00000486979 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
ALCAM-207ENST00000486979 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
ALCAM-207ENST00000486979 SLC4A1APQ9BWU0 796 aaKnown RBP15.08■□□□□ 0.01
ALCAM-207ENST00000486979 SLC4A2P04920 1241 aa15.06■□□□□ 0
ALCAM-207ENST00000486979 U3KPZ7 1027 aaPredicted RBP15.04■□□□□ -0
ALCAM-207ENST00000486979 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
ALCAM-207ENST00000486979 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
ALCAM-207ENST00000486979 APLP2Q06481 763 aa14.8□□□□□ -0.04
ALCAM-207ENST00000486979 MYCNP04198 464 aaPredicted RBP14.75□□□□□ -0.05
ALCAM-207ENST00000486979 FOXD4L1Q9NU39 408 aa14.75□□□□□ -0.05
ALCAM-207ENST00000486979 CAPN15O75808 1086 aa14.74□□□□□ -0.05
ALCAM-207ENST00000486979 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
ALCAM-207ENST00000486979 SPINK5Q9NQ38 1064 aaPredicted RBP14.71□□□□□ -0.05
ALCAM-207ENST00000486979 ZNF219Q9P2Y4 722 aaPredicted RBP14.59□□□□□ -0.07
ALCAM-207ENST00000486979 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
ALCAM-207ENST00000486979 ZBTB22O15209 634 aa14.54□□□□□ -0.08
ALCAM-207ENST00000486979 DSG3P32926 999 aa14.53□□□□□ -0.08
ALCAM-207ENST00000486979 ABCB7O75027 752 aa14.38□□□□□ -0.11
ALCAM-207ENST00000486979 ATXN8OSP0DMR3 200 aa14.3□□□□□ -0.12
ALCAM-207ENST00000486979 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
ALCAM-207ENST00000486979 POLA2Q14181 598 aa14.24□□□□□ -0.13
ALCAM-207ENST00000486979 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
ALCAM-207ENST00000486979 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
ALCAM-207ENST00000486979 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
ALCAM-207ENST00000486979 RBM42Q9BTD8 480 aaKnown RBP13.95□□□□□ -0.18
ALCAM-207ENST00000486979 FBLN2P98095 1184 aa13.84□□□□□ -0.19
ALCAM-207ENST00000486979 OSCARQ8IYS5 282 aa13.76□□□□□ -0.21
ALCAM-207ENST00000486979 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
ALCAM-207ENST00000486979 MKRN4PQ13434 485 aaPredicted RBP13.65□□□□□ -0.22
ALCAM-207ENST00000486979 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
ALCAM-207ENST00000486979 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
ALCAM-207ENST00000486979 SPDYE2Q495Y8 402 aa13.61□□□□□ -0.23
ALCAM-207ENST00000486979 REM2Q8IYK8 340 aaPredicted RBP13.5□□□□□ -0.25
ALCAM-207ENST00000486979 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
ALCAM-207ENST00000486979 CHRDL2Q6WN34 429 aa13.46□□□□□ -0.26
ALCAM-207ENST00000486979 POTEHQ6S545 545 aa13.44□□□□□ -0.26
ALCAM-207ENST00000486979 SSUH2Q9Y2M2 353 aa13.42□□□□□ -0.26
ALCAM-207ENST00000486979 PITPNM1O00562 1244 aa13.34□□□□□ -0.27
ALCAM-207ENST00000486979 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
ALCAM-207ENST00000486979 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
ALCAM-207ENST00000486979 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
ALCAM-207ENST00000486979 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
ALCAM-207ENST00000486979 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
ALCAM-207ENST00000486979 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
ALCAM-207ENST00000486979 PRR29P0C7W0 189 aa13.09□□□□□ -0.31
ALCAM-207ENST00000486979 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
ALCAM-207ENST00000486979 PRKAR2AP13861 404 aaKnown RBP13.02□□□□□ -0.32
ALCAM-207ENST00000486979 PROM2Q8N271 834 aa12.93□□□□□ -0.34
ALCAM-207ENST00000486979 HAX1O00165 279 aa12.9□□□□□ -0.34
ALCAM-207ENST00000486979 CHADLQ6NUI6 762 aa12.9□□□□□ -0.34
ALCAM-207ENST00000486979 FKBP8Q14318 412 aa12.9□□□□□ -0.34
ALCAM-207ENST00000486979 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
ALCAM-207ENST00000486979 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
ALCAM-207ENST00000486979 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
ALCAM-207ENST00000486979 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
ALCAM-207ENST00000486979 EVX2Q03828 476 aa12.67□□□□□ -0.38
ALCAM-207ENST00000486979 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
ALCAM-207ENST00000486979 NPM1P06748 294 aaKnown RBP eCLIP12.65□□□□□ -0.38
ALCAM-207ENST00000486979 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
ALCAM-207ENST00000486979 MIER1Q8N108 512 aa12.62□□□□□ -0.39
ALCAM-207ENST00000486979 FBXO3Q9UK99 471 aa12.61□□□□□ -0.39
ALCAM-207ENST00000486979 MNX1P50219 401 aaPredicted RBP12.58□□□□□ -0.4
ALCAM-207ENST00000486979 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.4
ALCAM-207ENST00000486979 PAK3O75914 559 aaPredicted RBP12.55□□□□□ -0.4
ALCAM-207ENST00000486979 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
ALCAM-207ENST00000486979 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
ALCAM-207ENST00000486979 CLCN6P51797 869 aa12.48□□□□□ -0.41
ALCAM-207ENST00000486979 GABBR2O75899 941 aa12.46□□□□□ -0.41
ALCAM-207ENST00000486979 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
ALCAM-207ENST00000486979 VASPP50552 380 aaPredicted RBP12.39□□□□□ -0.43
ALCAM-207ENST00000486979 TSPYL2Q9H2G4 693 aaPredicted RBP12.37□□□□□ -0.43
ALCAM-207ENST00000486979 PHF12Q96QT6 1004 aa12.32□□□□□ -0.44
ALCAM-207ENST00000486979 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
ALCAM-207ENST00000486979 KLHL34Q8N239 644 aa12.3□□□□□ -0.44
ALCAM-207ENST00000486979 NUBP1P53384 320 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms