RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 NISCHQ9Y2I1 1504 aa14.12□□□□□ -0.15
COL4A5-205ENST00000483338 PELP1Q8IZL8 1130 aaKnown RBP13.87□□□□□ -0.19
COL4A5-205ENST00000483338 MYT1Q01538 1121 aa13.51□□□□□ -0.25
COL4A5-205ENST00000483338 HRCP23327 699 aa13.43□□□□□ -0.26
COL4A5-205ENST00000483338 PPARGC1BQ86YN6 1023 aaKnown RBP13.15□□□□□ -0.3
COL4A5-205ENST00000483338 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
COL4A5-205ENST00000483338 TTBK1Q5TCY1 1321 aaPredicted RBP12.89□□□□□ -0.35
COL4A5-205ENST00000483338 PCGF6Q9BYE7 350 aa12.81□□□□□ -0.36
COL4A5-205ENST00000483338 PRKCSHP14314 528 aaPredicted RBP12.68□□□□□ -0.38
COL4A5-205ENST00000483338 BCL11AQ9H165 835 aa12.64□□□□□ -0.39
COL4A5-205ENST00000483338 MYO15BQ96JP2 1530 aa12.55□□□□□ -0.4
COL4A5-205ENST00000483338 FAM9AQ8IZU1 332 aaPredicted RBP12.54□□□□□ -0.4
COL4A5-205ENST00000483338 ACIN1Q9UKV3 1341 aaKnown RBP12.53□□□□□ -0.4
COL4A5-205ENST00000483338 NEUROD1Q13562 356 aa12.49□□□□□ -0.41
COL4A5-205ENST00000483338 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
COL4A5-205ENST00000483338 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
COL4A5-205ENST00000483338 CENPBP07199 599 aaPredicted RBP12.39□□□□□ -0.43
COL4A5-205ENST00000483338 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
COL4A5-205ENST00000483338 ERICH6Q7L0X2 663 aa12.28□□□□□ -0.44
COL4A5-205ENST00000483338 APLP2Q06481 763 aa12.27□□□□□ -0.45
COL4A5-205ENST00000483338 DCAF1Q9Y4B6 1507 aa12.24□□□□□ -0.45
COL4A5-205ENST00000483338 CCDC180Q9P1Z9 1646 aa12.23□□□□□ -0.45
COL4A5-205ENST00000483338 TRIM26Q12899 539 aaPredicted RBP12.2□□□□□ -0.46
COL4A5-205ENST00000483338 ANP32EQ9BTT0 268 aa12.18□□□□□ -0.46
COL4A5-205ENST00000483338 ABCC9O60706 1549 aa12.13□□□□□ -0.47
COL4A5-205ENST00000483338 CSRNP3Q8WYN3 585 aa12.1□□□□□ -0.47
COL4A5-205ENST00000483338 CHIC1Q5VXU3 224 aa12.1□□□□□ -0.47
COL4A5-205ENST00000483338 SUPT5HO00267 1087 aaKnown RBP12.09□□□□□ -0.47
COL4A5-205ENST00000483338 SHROOM4Q9ULL8 1493 aa12.09□□□□□ -0.47
COL4A5-205ENST00000483338 DIEXFQ68CQ4 756 aaKnown RBP11.95□□□□□ -0.5
COL4A5-205ENST00000483338 LOC105371045A0A1W2PR82 267 aa11.91□□□□□ -0.5
COL4A5-205ENST00000483338 TSHZ2Q9NRE2 1034 aa11.86□□□□□ -0.51
COL4A5-205ENST00000483338 YTHDC1Q96MU7 727 aaKnown RBP11.83□□□□□ -0.52
COL4A5-205ENST00000483338 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
COL4A5-205ENST00000483338 ZCCHC6Q5VYS8 1495 aaKnown RBP11.75□□□□□ -0.53
COL4A5-205ENST00000483338 SUPT16HQ9Y5B9 1047 aaKnown RBP11.72□□□□□ -0.53
COL4A5-205ENST00000483338 TRIM41Q8WV44 630 aa11.71□□□□□ -0.54
COL4A5-205ENST00000483338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.55
COL4A5-205ENST00000483338 SLC24A1O60721 1099 aa11.64□□□□□ -0.55
COL4A5-205ENST00000483338 UBE2Q2Q8WVN8 375 aa11.63□□□□□ -0.55
COL4A5-205ENST00000483338 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
COL4A5-205ENST00000483338 CCER1Q8TC90 406 aaPredicted RBP11.61□□□□□ -0.55
COL4A5-205ENST00000483338 MIER1Q8N108 512 aa11.6□□□□□ -0.55
COL4A5-205ENST00000483338 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
COL4A5-205ENST00000483338 SALL2Q9Y467 1007 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-205ENST00000483338 PABPN1Q86U42 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
COL4A5-205ENST00000483338 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
COL4A5-205ENST00000483338 NACADO15069 1562 aa11.54□□□□□ -0.56
COL4A5-205ENST00000483338 RB1CC1Q8TDY2 1594 aa11.54□□□□□ -0.56
COL4A5-205ENST00000483338 EIF5BO60841 1220 aaKnown RBP11.53□□□□□ -0.56
COL4A5-205ENST00000483338 CCDC136Q96JN2 1154 aa11.53□□□□□ -0.56
COL4A5-205ENST00000483338 MSH5O43196 834 aa11.5□□□□□ -0.57
COL4A5-205ENST00000483338 RBM19Q9Y4C8 960 aaKnown RBP11.49□□□□□ -0.57
COL4A5-205ENST00000483338 SCRIBQ14160 1630 aa11.45□□□□□ -0.58
COL4A5-205ENST00000483338 DEKP35659 375 aaKnown RBP11.45□□□□□ -0.58
COL4A5-205ENST00000483338 ERICH6BQ5W0A0 696 aa11.4□□□□□ -0.58
COL4A5-205ENST00000483338 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
COL4A5-205ENST00000483338 DAXXQ9UER7 740 aaPredicted RBP11.38□□□□□ -0.59
COL4A5-205ENST00000483338 MYT1LQ9UL68 1186 aa11.38□□□□□ -0.59
COL4A5-205ENST00000483338 BCANQ96GW7 911 aa11.35□□□□□ -0.59
COL4A5-205ENST00000483338 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.35□□□□□ -0.59
COL4A5-205ENST00000483338 PKNOX2Q96KN3 472 aa11.35□□□□□ -0.59
COL4A5-205ENST00000483338 FANCIQ9NVI1 1328 aa11.28□□□□□ -0.6
COL4A5-205ENST00000483338 IL27Q8NEV9 243 aa11.25□□□□□ -0.61
COL4A5-205ENST00000483338 FKBP8Q14318 412 aa11.23□□□□□ -0.61
COL4A5-205ENST00000483338 PODXL2Q9NZ53 605 aa11.23□□□□□ -0.61
COL4A5-205ENST00000483338 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
COL4A5-205ENST00000483338 ITGAEP38570 1179 aa11.19□□□□□ -0.62
COL4A5-205ENST00000483338 NBR1Q14596 966 aa11.12□□□□□ -0.63
COL4A5-205ENST00000483338 CECR2Q9BXF3 1484 aa11.09□□□□□ -0.63
COL4A5-205ENST00000483338 BICRAQ9NZM4 1560 aa11.06□□□□□ -0.64
COL4A5-205ENST00000483338 KCNH8Q96L42 1107 aa11.05□□□□□ -0.64
COL4A5-205ENST00000483338 UNC13AQ9UPW8 1703 aa11.05□□□□□ -0.64
COL4A5-205ENST00000483338 NEFLP07196 543 aa11.04□□□□□ -0.64
COL4A5-205ENST00000483338 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
COL4A5-205ENST00000483338 CDK11AQ9UQ88 783 aaPredicted RBP11.01□□□□□ -0.65
COL4A5-205ENST00000483338 NOP58Q9Y2X3 529 aaKnown RBP11.01□□□□□ -0.65
COL4A5-205ENST00000483338 ZMYND15Q9H091 742 aa11□□□□□ -0.65
COL4A5-205ENST00000483338 TIMELESSQ9UNS1 1208 aa10.97□□□□□ -0.65
COL4A5-205ENST00000483338 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.65
COL4A5-205ENST00000483338 RTL5Q5HYW3 569 aaPredicted RBP10.95□□□□□ -0.66
COL4A5-205ENST00000483338 MROH2BQ7Z745 1585 aa10.94□□□□□ -0.66
COL4A5-205ENST00000483338 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
COL4A5-205ENST00000483338 BAZ1AQ9NRL2 1556 aaPredicted RBP10.93□□□□□ -0.66
COL4A5-205ENST00000483338 VSIG10Q8N0Z9 540 aa10.92□□□□□ -0.66
COL4A5-205ENST00000483338 GLIPR1L2Q4G1C9 344 aa10.9□□□□□ -0.66
COL4A5-205ENST00000483338 WASHC2AQ641Q2 1341 aa10.89□□□□□ -0.67
COL4A5-205ENST00000483338 DNAJC5BQ9UF47 199 aa10.89□□□□□ -0.67
COL4A5-205ENST00000483338 BRPF3Q9ULD4 1205 aa10.88□□□□□ -0.67
COL4A5-205ENST00000483338 RSPH6AQ9H0K4 717 aa10.87□□□□□ -0.67
COL4A5-205ENST00000483338 WRNQ14191 1432 aaPredicted RBP eCLIP10.86□□□□□ -0.67
COL4A5-205ENST00000483338 WASHC2CQ9Y4E1 1318 aa10.86□□□□□ -0.67
COL4A5-205ENST00000483338 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
COL4A5-205ENST00000483338 RANGAP1P46060 587 aaPredicted RBP10.85□□□□□ -0.67
COL4A5-205ENST00000483338 SMARCA4P51532 1647 aa10.83□□□□□ -0.68
COL4A5-205ENST00000483338 A0A0U1RQG5 324 aaPredicted RBP10.83□□□□□ -0.68
COL4A5-205ENST00000483338 TRIM52Q96A61 297 aa10.83□□□□□ -0.68
COL4A5-205ENST00000483338 IRX6P78412 446 aaPredicted RBP10.82□□□□□ -0.68
COL4A5-205ENST00000483338 BAZ1BQ9UIG0 1483 aaKnown RBP10.81□□□□□ -0.68
COL4A5-205ENST00000483338 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms