Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC117947.1-201ENST00000427448 529 ntBASIC11.49□□□□□ -0.57
UBR4Q5T4S7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 PMS2P2-201ENST00000425039 1128 ntBASIC11.49□□□□□ -0.57
UBR4Q5T4S7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 AC100791.3-201ENST00000617619 330 ntBASIC11.49□□□□□ -0.57
UBR4Q5T4S7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
UBR4Q5T4S7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 AP006587.3-201ENST00000525742 1516 ntBASIC11.48□□□□□ -0.57
UBR4Q5T4S7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 MIR564-202ENST00000385049 94 ntBASIC11.48□□□□□ -0.57
UBR4Q5T4S7 FXN-202ENST00000396364 980 ntTSL 5 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 AC130371.2-201ENST00000619443 611 ntBASIC11.48□□□□□ -0.57
UBR4Q5T4S7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
UBR4Q5T4S7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 AC073195.1-201ENST00000607241 877 ntBASIC11.47□□□□□ -0.57
UBR4Q5T4S7 AC012313.10-201ENST00000623509 926 ntBASIC11.47□□□□□ -0.57
UBR4Q5T4S7 AL121956.5-201ENST00000625261 221 ntBASIC11.47□□□□□ -0.57
UBR4Q5T4S7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 LIN28AP1-201ENST00000429574 405 ntBASIC11.47□□□□□ -0.57
UBR4Q5T4S7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.47□□□□□ -0.57
UBR4Q5T4S7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBR4Q5T4S7 DUSP8P3-201ENST00000399571 1760 ntBASIC11.46□□□□□ -0.57
UBR4Q5T4S7 PGM5P4-201ENST00000421970 445 ntBASIC11.46□□□□□ -0.57
UBR4Q5T4S7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC11.46□□□□□ -0.57
UBR4Q5T4S7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBR4Q5T4S7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC11.46□□□□□ -0.57
UBR4Q5T4S7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 AC104692.2-201ENST00000603054 253 ntBASIC11.46□□□□□ -0.58
UBR4Q5T4S7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBR4Q5T4S7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms