Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CLDN6P56747 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.9■□□□□ 0.78
CLDN6P56747 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.9■□□□□ 0.78
CLDN6P56747 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CLDN6P56747 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CLDN6P56747 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLDN6P56747 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLDN6P56747 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN6P56747 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLDN6P56747 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN6P56747 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CLDN6P56747 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.89■□□□□ 0.77
CLDN6P56747 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.89■□□□□ 0.77
CLDN6P56747 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.89■□□□□ 0.77
CLDN6P56747 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.89■□□□□ 0.77
CLDN6P56747 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CLDN6P56747 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLDN6P56747 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.89■□□□□ 0.77
CLDN6P56747 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN6P56747 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CLDN6P56747 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CLDN6P56747 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN6P56747 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLDN6P56747 C9orf163-202ENST00000624034 2573 ntBASIC19.88■□□□□ 0.77
CLDN6P56747 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN6P56747 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CLDN6P56747 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CLDN6P56747 BX088651.1-201ENST00000540551 451 ntBASIC19.88■□□□□ 0.77
CLDN6P56747 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLDN6P56747 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CLDN6P56747 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDN6P56747 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN6P56747 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN6P56747 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN6P56747 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN6P56747 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN6P56747 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDN6P56747 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN6P56747 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN6P56747 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN6P56747 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN6P56747 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDN6P56747 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN6P56747 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDN6P56747 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN6P56747 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN6P56747 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN6P56747 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 POM121L13P-201ENST00000422362 380 ntBASIC19.86■□□□□ 0.77
CLDN6P56747 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDN6P56747 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 LINC01023-201ENST00000606054 436 ntBASIC19.86■□□□□ 0.77
CLDN6P56747 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CLDN6P56747 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDN6P56747 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CLDN6P56747 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLDN6P56747 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CLDN6P56747 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLDN6P56747 AC092053.2-201ENST00000640557 1818 ntBASIC19.86■□□□□ 0.77
CLDN6P56747 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN6P56747 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN6P56747 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN6P56747 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CLDN6P56747 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLDN6P56747 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDN6P56747 AC080038.3-201ENST00000623346 1952 ntBASIC19.85■□□□□ 0.77
CLDN6P56747 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN6P56747 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN6P56747 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN6P56747 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDN6P56747 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.85■□□□□ 0.77
CLDN6P56747 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CLDN6P56747 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.85■□□□□ 0.77
CLDN6P56747 AC007322.3-201ENST00000426526 701 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms