Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ATP2A1O14983 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ATP2A1O14983 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.75■■□□□ 1.39
ATP2A1O14983 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.75■■□□□ 1.39
ATP2A1O14983 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
ATP2A1O14983 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
ATP2A1O14983 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.75■■□□□ 1.39
ATP2A1O14983 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.75■■□□□ 1.39
ATP2A1O14983 RPS2P52-201ENST00000469610 820 ntBASIC23.75■■□□□ 1.39
ATP2A1O14983 AC093827.2-201ENST00000512654 315 ntBASIC23.75■■□□□ 1.39
ATP2A1O14983 AC008403.3-201ENST00000598924 454 ntBASIC23.75■■□□□ 1.39
ATP2A1O14983 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.75■■□□□ 1.39
ATP2A1O14983 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ATP2A1O14983 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ATP2A1O14983 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ATP2A1O14983 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ATP2A1O14983 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.74■■□□□ 1.39
ATP2A1O14983 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.74■■□□□ 1.39
ATP2A1O14983 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ATP2A1O14983 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
ATP2A1O14983 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ATP2A1O14983 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ATP2A1O14983 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ATP2A1O14983 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ATP2A1O14983 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ATP2A1O14983 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.73■■□□□ 1.39
ATP2A1O14983 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.73■■□□□ 1.39
ATP2A1O14983 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ATP2A1O14983 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
ATP2A1O14983 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ATP2A1O14983 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ATP2A1O14983 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
ATP2A1O14983 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
ATP2A1O14983 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ATP2A1O14983 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
ATP2A1O14983 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ATP2A1O14983 AC233723.2-201ENST00000623798 2106 ntBASIC23.72■■□□□ 1.39
ATP2A1O14983 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ATP2A1O14983 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.72■■□□□ 1.39
ATP2A1O14983 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
ATP2A1O14983 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ATP2A1O14983 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
ATP2A1O14983 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.72■■□□□ 1.39
ATP2A1O14983 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.72■■□□□ 1.39
ATP2A1O14983 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.72■■□□□ 1.39
ATP2A1O14983 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.72■■□□□ 1.39
ATP2A1O14983 AC105020.6-201ENST00000621523 1217 ntBASIC23.72■■□□□ 1.39
ATP2A1O14983 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.72■■□□□ 1.39
ATP2A1O14983 AC073648.6-201ENST00000641589 218 ntBASIC23.72■■□□□ 1.39
ATP2A1O14983 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ATP2A1O14983 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
ATP2A1O14983 ECEL1P1-201ENST00000373592 1742 ntBASIC23.72■■□□□ 1.39
ATP2A1O14983 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ATP2A1O14983 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ATP2A1O14983 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ATP2A1O14983 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
ATP2A1O14983 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ATP2A1O14983 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.71■■□□□ 1.39
ATP2A1O14983 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.71■■□□□ 1.39
ATP2A1O14983 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.71■■□□□ 1.39
ATP2A1O14983 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
ATP2A1O14983 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ATP2A1O14983 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ATP2A1O14983 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ATP2A1O14983 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ATP2A1O14983 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.71■■□□□ 1.39
ATP2A1O14983 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.71■■□□□ 1.39
ATP2A1O14983 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ATP2A1O14983 PNMA6B-201ENST00000538162 1200 ntBASIC23.71■■□□□ 1.39
ATP2A1O14983 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ATP2A1O14983 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
ATP2A1O14983 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ATP2A1O14983 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ATP2A1O14983 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.7■■□□□ 1.39
ATP2A1O14983 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ATP2A1O14983 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
ATP2A1O14983 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.7■■□□□ 1.38
ATP2A1O14983 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.7■■□□□ 1.38
ATP2A1O14983 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ATP2A1O14983 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.7■■□□□ 1.38
ATP2A1O14983 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
ATP2A1O14983 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.7■■□□□ 1.38
ATP2A1O14983 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.7■■□□□ 1.38
ATP2A1O14983 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.7■■□□□ 1.38
ATP2A1O14983 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.7■■□□□ 1.38
ATP2A1O14983 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
ATP2A1O14983 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms