Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 AC137761.2-201ENST00000561729 223 ntBASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 AC145350.3-201ENST00000569033 163 ntBASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV2A0A0B4J234 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 AC026310.3-201ENST00000625186 2373 ntBASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 MIR935-201ENST00000401179 91 ntBASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 SLC7A5P2-201ENST00000553010 536 ntBASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV2A0A0B4J234 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 AL137060.1-201ENST00000618151 2648 ntBASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 AC016769.1-201ENST00000409132 1010 ntBASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 UBE2DNL-204ENST00000602536 740 ntBASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV2A0A0B4J234 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV2A0A0B4J234 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
TRAV2A0A0B4J234 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV2A0A0B4J234 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.58■□□□□ 0.09
TRAV2A0A0B4J234 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.58■□□□□ 0.09
TRAV2A0A0B4J234 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV2A0A0B4J234 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 RARRES2P11-201ENST00000635158 484 ntBASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 RBM17P2-201ENST00000616397 1405 ntBASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV2A0A0B4J234 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV2A0A0B4J234 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms