Protein–RNA interactions for Protein: Q9NSI6

BRWD1, Bromodomain and WD repeat-containing protein 1, humanhuman

Predictions only

Length 2,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1Q9NSI6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BRWD1Q9NSI6 AC007322.3-201ENST00000426526 701 ntBASIC21.79■■□□□ 1.08
BRWD1Q9NSI6 CDV3P1-201ENST00000471403 739 ntBASIC21.79■■□□□ 1.08
BRWD1Q9NSI6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
BRWD1Q9NSI6 AC120498.8-201ENST00000614275 531 ntBASIC21.79■■□□□ 1.08
BRWD1Q9NSI6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BRWD1Q9NSI6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.79■■□□□ 1.08
BRWD1Q9NSI6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 MIR6786-201ENST00000616843 113 ntBASIC21.78■■□□□ 1.08
BRWD1Q9NSI6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BRWD1Q9NSI6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.77■■□□□ 1.08
BRWD1Q9NSI6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.77■■□□□ 1.08
BRWD1Q9NSI6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.77■■□□□ 1.08
BRWD1Q9NSI6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.77■■□□□ 1.08
BRWD1Q9NSI6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.77■■□□□ 1.08
BRWD1Q9NSI6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRWD1Q9NSI6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.77■■□□□ 1.08
BRWD1Q9NSI6 AC105020.6-201ENST00000621523 1217 ntBASIC21.77■■□□□ 1.08
BRWD1Q9NSI6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRWD1Q9NSI6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.77■■□□□ 1.08
BRWD1Q9NSI6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
BRWD1Q9NSI6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
BRWD1Q9NSI6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.77■■□□□ 1.07
BRWD1Q9NSI6 KRT18P57-201ENST00000443599 1254 ntBASIC21.77■■□□□ 1.07
BRWD1Q9NSI6 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.77■■□□□ 1.07
BRWD1Q9NSI6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.77■■□□□ 1.07
BRWD1Q9NSI6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.77■■□□□ 1.07
BRWD1Q9NSI6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
BRWD1Q9NSI6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.77■■□□□ 1.07
BRWD1Q9NSI6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.77■■□□□ 1.07
BRWD1Q9NSI6 C11orf96-202ENST00000528572 1834 ntBASIC21.77■■□□□ 1.07
BRWD1Q9NSI6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRWD1Q9NSI6 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.76■■□□□ 1.07
BRWD1Q9NSI6 AC113347.1-201ENST00000413321 391 ntBASIC21.76■■□□□ 1.07
BRWD1Q9NSI6 PRKY-204ENST00000533551 1019 ntBASIC21.76■■□□□ 1.07
BRWD1Q9NSI6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
BRWD1Q9NSI6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
BRWD1Q9NSI6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRWD1Q9NSI6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRWD1Q9NSI6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRWD1Q9NSI6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.76■■□□□ 1.07
BRWD1Q9NSI6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.75■■□□□ 1.07
BRWD1Q9NSI6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 AC087742.1-201ENST00000575880 1738 ntBASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 NTF6B-201ENST00000591913 560 ntBASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
BRWD1Q9NSI6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 KRASP1-201ENST00000407852 552 ntBASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 AC145285.6-201ENST00000604632 637 ntBASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BRWD1Q9NSI6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms