Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD8Q9HCK8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 REXO1L10P-201ENST00000615707 1290 ntBASIC19.59■□□□□ 0.73
CHD8Q9HCK8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 AC008175.2-201ENST00000612840 297 ntBASIC19.59■□□□□ 0.73
CHD8Q9HCK8 AC006011.2-201ENST00000621313 1158 ntBASIC19.59■□□□□ 0.73
CHD8Q9HCK8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD8Q9HCK8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD8Q9HCK8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD8Q9HCK8 FAM197Y1-201ENST00000421178 764 ntBASIC19.58■□□□□ 0.73
CHD8Q9HCK8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.58■□□□□ 0.73
CHD8Q9HCK8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHD8Q9HCK8 CLEC4GP1-201ENST00000596555 870 ntBASIC19.58■□□□□ 0.73
CHD8Q9HCK8 AP000550.4-202ENST00000639755 178 ntBASIC19.58■□□□□ 0.73
CHD8Q9HCK8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHD8Q9HCK8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD8Q9HCK8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD8Q9HCK8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHD8Q9HCK8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CHD8Q9HCK8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.58■□□□□ 0.72
CHD8Q9HCK8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHD8Q9HCK8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.58■□□□□ 0.72
CHD8Q9HCK8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.58■□□□□ 0.72
CHD8Q9HCK8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHD8Q9HCK8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHD8Q9HCK8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHD8Q9HCK8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CHD8Q9HCK8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD8Q9HCK8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CHD8Q9HCK8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD8Q9HCK8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD8Q9HCK8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.55■□□□□ 0.72
CHD8Q9HCK8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.55■□□□□ 0.72
CHD8Q9HCK8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD8Q9HCK8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.55■□□□□ 0.72
CHD8Q9HCK8 AK4P3-201ENST00000418260 669 ntBASIC19.55■□□□□ 0.72
CHD8Q9HCK8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.55■□□□□ 0.72
CHD8Q9HCK8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.55■□□□□ 0.72
CHD8Q9HCK8 AC073195.1-201ENST00000607241 877 ntBASIC19.55■□□□□ 0.72
CHD8Q9HCK8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHD8Q9HCK8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHD8Q9HCK8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD8Q9HCK8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD8Q9HCK8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHD8Q9HCK8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.54■□□□□ 0.72
CHD8Q9HCK8 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.54■□□□□ 0.72
CHD8Q9HCK8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.54■□□□□ 0.72
CHD8Q9HCK8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms