Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.08■□□□□ 0.81
SPTBN4Q9H254 UNC93B2-201ENST00000285383 730 ntBASIC20.08■□□□□ 0.81
SPTBN4Q9H254 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.08■□□□□ 0.81
SPTBN4Q9H254 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.08■□□□□ 0.81
SPTBN4Q9H254 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.08■□□□□ 0.81
SPTBN4Q9H254 AL034346.1-201ENST00000568244 1277 ntBASIC20.08■□□□□ 0.81
SPTBN4Q9H254 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.08■□□□□ 0.81
SPTBN4Q9H254 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.08■□□□□ 0.81
SPTBN4Q9H254 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SPTBN4Q9H254 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SPTBN4Q9H254 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SPTBN4Q9H254 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SPTBN4Q9H254 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.08■□□□□ 0.8
SPTBN4Q9H254 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.08■□□□□ 0.8
SPTBN4Q9H254 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.08■□□□□ 0.8
SPTBN4Q9H254 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.08■□□□□ 0.8
SPTBN4Q9H254 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.08■□□□□ 0.8
SPTBN4Q9H254 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SPTBN4Q9H254 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SPTBN4Q9H254 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPTBN4Q9H254 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.07■□□□□ 0.8
SPTBN4Q9H254 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPTBN4Q9H254 FAM8A6P-201ENST00000407496 1135 ntBASIC20.07■□□□□ 0.8
SPTBN4Q9H254 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.07■□□□□ 0.8
SPTBN4Q9H254 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.07■□□□□ 0.8
SPTBN4Q9H254 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SPTBN4Q9H254 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPTBN4Q9H254 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SPTBN4Q9H254 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SPTBN4Q9H254 AC246785.2-201ENST00000432512 513 ntBASIC20.06■□□□□ 0.8
SPTBN4Q9H254 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SPTBN4Q9H254 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.06■□□□□ 0.8
SPTBN4Q9H254 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
SPTBN4Q9H254 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.06■□□□□ 0.8
SPTBN4Q9H254 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.06■□□□□ 0.8
SPTBN4Q9H254 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SPTBN4Q9H254 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.06■□□□□ 0.8
SPTBN4Q9H254 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SPTBN4Q9H254 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 FITM1-202ENST00000559294 800 ntBASIC20.05■□□□□ 0.8
SPTBN4Q9H254 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTBN4Q9H254 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 LINC01238-205ENST00000567549 1107 ntBASIC20.04■□□□□ 0.8
SPTBN4Q9H254 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTBN4Q9H254 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 KRT18P68-201ENST00000392293 1000 ntBASIC20.03■□□□□ 0.8
SPTBN4Q9H254 AL353807.1-201ENST00000427475 662 ntBASIC20.03■□□□□ 0.8
SPTBN4Q9H254 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.03■□□□□ 0.8
SPTBN4Q9H254 AL691432.3-201ENST00000621860 400 ntBASIC20.03■□□□□ 0.8
SPTBN4Q9H254 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms