Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
COMMD4Q9H0A8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 BX842568.3-201ENST00000418104 571 ntBASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COMMD4Q9H0A8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.25■□□□□ 0.51
COMMD4Q9H0A8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 AC007225.1-201ENST00000566331 1836 ntBASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COMMD4Q9H0A8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COMMD4Q9H0A8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 AC126544.1-201ENST00000580842 1059 ntBASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COMMD4Q9H0A8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms