Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC47A1Q96FL8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC47A1Q96FL8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC47A1Q96FL8 AC020907.5-201ENST00000624372 1936 ntBASIC19.51■□□□□ 0.71
SLC47A1Q96FL8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC47A1Q96FL8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 AC126544.1-201ENST00000580842 1059 ntBASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SLC47A1Q96FL8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 AC007225.1-201ENST00000566331 1836 ntBASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC47A1Q96FL8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 AC096631.2-201ENST00000436136 790 ntBASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SLC47A1Q96FL8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 PBX2P1-201ENST00000493219 1291 ntBASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 AC133561.4-201ENST00000566112 224 ntBASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SLC47A1Q96FL8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC47A1Q96FL8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms