Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CLDN22Q8N7P3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 MIR572-201ENST00000384983 95 ntBASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN22Q8N7P3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 AC007225.1-201ENST00000566331 1836 ntBASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN22Q8N7P3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 BX005040.4-201ENST00000637145 1518 ntBASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.84■□□□□ 0.61
CLDN22Q8N7P3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.83■□□□□ 0.61
CLDN22Q8N7P3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CLDN22Q8N7P3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.83■□□□□ 0.61
CLDN22Q8N7P3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN22Q8N7P3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 AC142381.2-201ENST00000566120 298 ntBASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN22Q8N7P3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 AC027702.1-201ENST00000563810 1770 ntBASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN22Q8N7P3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN22Q8N7P3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN22Q8N7P3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN22Q8N7P3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN22Q8N7P3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN22Q8N7P3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms