Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 CUTA-205ENST00000462802 1054 ntTSL 1 (best)10.48□□□□□ -0.732e-9■■■□□ 18
LARP4Q71RC2 CUTA-211ENST00000488478 676 ntTSL 5 BASIC9.94□□□□□ -0.822e-9■■■□□ 18
LARP4Q71RC2 CUTA-213ENST00000494751 731 ntTSL 5 BASIC9.53□□□□□ -0.882e-9■■■□□ 18
LARP4Q71RC2 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.972e-9■■■□□ 18
LARP4Q71RC2 PHB2-205ENST00000537646 874 ntTSL 513.77□□□□□ -0.212e-12■■■□□ 18
LARP4Q71RC2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.612e-6■■■□□ 18
LARP4Q71RC2 B3GAT3-203ENST00000532585 1534 ntTSL 1 (best)18.18■□□□□ 0.51e-6■■■□□ 18
LARP4Q71RC2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.13■■□□□ 1.617e-7■■■□□ 18
LARP4Q71RC2 SERPING1-208ENST00000528996 956 ntTSL 315.02■□□□□ -07e-7■■■□□ 18
LARP4Q71RC2 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.167e-7■■■□□ 18
LARP4Q71RC2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.257e-7■■■□□ 18
LARP4Q71RC2 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.37e-7■■■□□ 18
LARP4Q71RC2 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC13.05□□□□□ -0.327e-7■■■□□ 18
LARP4Q71RC2 SERPING1-212ENST00000531797 907 ntTSL 1 (best)8.86□□□□□ -0.997e-7■■■□□ 18
LARP4Q71RC2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.793e-7■■■□□ 18
LARP4Q71RC2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.58■■□□□ 1.533e-7■■■□□ 18
LARP4Q71RC2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.91■■□□□ 1.423e-7■■■□□ 18
LARP4Q71RC2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.343e-7■■■□□ 18
LARP4Q71RC2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.54□□□□□ -0.43e-7■■■□□ 18
LARP4Q71RC2 H2AFV-203ENST00000349299 596 ntTSL 2 BASIC9.09□□□□□ -0.953e-7■■■□□ 18
LARP4Q71RC2 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.03□□□□□ -1.443e-7■■■□□ 18
LARP4Q71RC2 RPS5-206ENST00000598807 970 ntTSL 215.78■□□□□ 0.122e-13■■■□□ 18
LARP4Q71RC2 WNK2-206ENST00000448039 2385 ntAPPRIS ALT2 TSL 1 (best)21.44■■□□□ 1.022e-6■■■□□ 18
LARP4Q71RC2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.08■□□□□ 0.492e-6■■■□□ 18
LARP4Q71RC2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.382e-6■■■□□ 18
LARP4Q71RC2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.132e-6■■■□□ 18
LARP4Q71RC2 WNK2-205ENST00000432730 7792 ntAPPRIS ALT2 TSL 1 (best)15.08■□□□□ 02e-6■■■□□ 18
LARP4Q71RC2 CD99-207ENST00000482293 466 ntTSL 218.85■□□□□ 0.614e-7■■■□□ 18
LARP4Q71RC2 UQCC2-202ENST00000374231 509 ntTSL 313.29□□□□□ -0.282e-8■■■□□ 18
LARP4Q71RC2 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC12.9□□□□□ -0.342e-8■■■□□ 18
LARP4Q71RC2 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.382e-8■■■□□ 18
LARP4Q71RC2 GOT1-201ENST00000370508 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.658e-9■■■□□ 18
LARP4Q71RC2 GOT1-203ENST00000489349 646 ntTSL 25.61□□□□□ -1.518e-9■■■□□ 18
LARP4Q71RC2 SUPT4H1-204ENST00000580947 574 ntAPPRIS P1 TSL 4 BASIC9.63□□□□□ -0.873e-24■■■□□ 17.9
LARP4Q71RC2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.41■■□□□ 1.52e-7■■■□□ 17.9
LARP4Q71RC2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.282e-7■■■□□ 17.9
LARP4Q71RC2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.212e-7■■■□□ 17.9
LARP4Q71RC2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.052e-7■■■□□ 17.9
LARP4Q71RC2 DAZAP1-208ENST00000589874 3642 nt13.59□□□□□ -0.232e-7■■■□□ 17.9
LARP4Q71RC2 DAZAP1-203ENST00000585485 3943 ntTSL 212.56□□□□□ -0.42e-7■■■□□ 17.9
LARP4Q71RC2 DAZAP1-207ENST00000589484 3414 ntTSL 212.48□□□□□ -0.412e-7■■■□□ 17.9
LARP4Q71RC2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.244e-7■■■□□ 17.9
LARP4Q71RC2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.384e-7■■■□□ 17.9
LARP4Q71RC2 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC12.11□□□□□ -0.472e-6■■■□□ 17.9
LARP4Q71RC2 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.512e-6■■■□□ 17.9
LARP4Q71RC2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.58■□□□□ 0.242e-10■■■□□ 17.9
LARP4Q71RC2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.85■□□□□ 0.773e-25■■■□□ 17.9
LARP4Q71RC2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.56□□□□□ -0.243e-25■■■□□ 17.9
LARP4Q71RC2 APOC3-201ENST00000227667 550 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.793e-25■■■□□ 17.9
LARP4Q71RC2 MANF-203ENST00000482262 436 ntTSL 24.64□□□□□ -1.673e-7■■■□□ 17.9
LARP4Q71RC2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.79□□□□□ -0.28e-61■■■□□ 17.9
LARP4Q71RC2 RPS24-210ENST00000478655 727 ntTSL 1 (best)5.74□□□□□ -1.498e-61■■■□□ 17.9
LARP4Q71RC2 RPS24-205ENST00000464716 452 ntTSL 24.82□□□□□ -1.648e-61■■■□□ 17.9
LARP4Q71RC2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.062e-11■■■□□ 17.9
LARP4Q71RC2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.31■■□□□ 1.166e-7■■■□□ 17.9
LARP4Q71RC2 STRBP-203ENST00000407982 2751 ntTSL 1 (best)21.31■■□□□ 16e-7■■■□□ 17.9
LARP4Q71RC2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.676e-7■■■□□ 17.9
LARP4Q71RC2 STRBP-207ENST00000479114 832 ntTSL 36.14□□□□□ -1.436e-7■■■□□ 17.9
LARP4Q71RC2 MDK-211ENST00000533283 498 ntTSL 314.66□□□□□ -0.061e-11■■■□□ 17.8
LARP4Q71RC2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.234e-8■■■□□ 17.8
LARP4Q71RC2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.554e-8■■■□□ 17.8
LARP4Q71RC2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.134e-8■■■□□ 17.8
LARP4Q71RC2 ARL2-206ENST00000533729 795 ntTSL 5 BASIC10.98□□□□□ -0.654e-8■■■□□ 17.8
LARP4Q71RC2 FBXO2-204ENST00000471501 725 ntTSL 216.97■□□□□ 0.319e-9■■■□□ 17.8
LARP4Q71RC2 FBXO2-203ENST00000466919 774 ntTSL 516.94■□□□□ 0.39e-9■■■□□ 17.8
LARP4Q71RC2 RPS19-205ENST00000598466 601 ntTSL 211.18□□□□□ -0.622e-17■■■□□ 17.8
LARP4Q71RC2 CD99-209ENST00000497752 806 ntTSL 210.11□□□□□ -0.797e-7■■■□□ 17.8
LARP4Q71RC2 RPL13-203ENST00000399461 879 ntTSL 220.3■□□□□ 0.848e-8■■■□□ 17.8
LARP4Q71RC2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.191e-7■■■□□ 17.8
LARP4Q71RC2 CKB-207ENST00000554282 735 ntTSL 218.78■□□□□ 0.61e-7■■■□□ 17.8
LARP4Q71RC2 CKB-204ENST00000553652 1239 ntTSL 516.88■□□□□ 0.291e-7■■■□□ 17.8
LARP4Q71RC2 CKB-202ENST00000553528 1170 ntTSL 215.61■□□□□ 0.091e-7■■■□□ 17.8
LARP4Q71RC2 CKB-210ENST00000554989 625 ntTSL 214.63□□□□□ -0.071e-7■■■□□ 17.8
LARP4Q71RC2 PRKRIP1-207ENST00000482549 1625 ntTSL 1 (best)24.84■■□□□ 1.574e-6■■■□□ 17.7
LARP4Q71RC2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.54e-6■■■□□ 17.7
LARP4Q71RC2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.354e-6■■■□□ 17.7
LARP4Q71RC2 PRKRIP1-204ENST00000469763 1642 ntTSL 522.57■■□□□ 1.24e-6■■■□□ 17.7
LARP4Q71RC2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.11e-8■■■□□ 17.7
LARP4Q71RC2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.81■■□□□ 1.082e-6■■■□□ 17.7
LARP4Q71RC2 PRKRIP1-205ENST00000477886 986 ntTSL 1 (best)21.62■■□□□ 1.054e-6■■■□□ 17.7
LARP4Q71RC2 TMC6-209ENST00000588087 2384 ntTSL 221.55■■□□□ 1.041e-7■■■□□ 17.7
LARP4Q71RC2 QKI-204ENST00000361758 6085 ntTSL 521.46■■□□□ 1.032e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-223ENST00000498173 1589 ntTSL 221.06■□□□□ 0.964e-6■■■□□ 17.7
LARP4Q71RC2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.97■□□□□ 0.951e-7■■■□□ 17.7
LARP4Q71RC2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.76■□□□□ 0.914e-6■■■□□ 17.7
LARP4Q71RC2 CROCCP3-206ENST00000591348 1695 ntTSL 1 (best)20.72■□□□□ 0.914e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.864e-6■■■□□ 17.7
LARP4Q71RC2 MIS18BP1-204ENST00000454990 2131 ntTSL 219.69■□□□□ 0.744e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.66■□□□□ 0.744e-6■■■□□ 17.7
LARP4Q71RC2 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.4■□□□□ 0.74e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.35■□□□□ 0.694e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.25■□□□□ 0.674e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19■□□□□ 0.634e-6■■■□□ 17.7
LARP4Q71RC2 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.61e-6■■■□□ 17.7
LARP4Q71RC2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.573e-7■■■□□ 17.7
LARP4Q71RC2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.6■□□□□ 0.572e-6■■■□□ 17.7
LARP4Q71RC2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.564e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-235ENST00000527719 750 ntTSL 518.28■□□□□ 0.524e-6■■■□□ 17.7
LARP4Q71RC2 INTS11-221ENST00000496353 2428 ntTSL 218.02■□□□□ 0.484e-6■■■□□ 17.7
LARP4Q71RC2 AC020916.1-201ENST00000587762 1774 ntBASIC18.01■□□□□ 0.474e-6■■■□□ 17.7
Retrieved 100 of 15,922 protein–RNA pairs in 158.7 ms