Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RBM48Q5RL73 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RBM48Q5RL73 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RBM48Q5RL73 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.92■□□□□ 0.62
RBM48Q5RL73 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.92■□□□□ 0.62
RBM48Q5RL73 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RBM48Q5RL73 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RBM48Q5RL73 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RBM48Q5RL73 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.92■□□□□ 0.62
RBM48Q5RL73 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RBM48Q5RL73 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RBM48Q5RL73 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.92■□□□□ 0.62
RBM48Q5RL73 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RBM48Q5RL73 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
RBM48Q5RL73 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.92■□□□□ 0.62
RBM48Q5RL73 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RBM48Q5RL73 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RBM48Q5RL73 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RBM48Q5RL73 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RBM48Q5RL73 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RBM48Q5RL73 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RBM48Q5RL73 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.91■□□□□ 0.62
RBM48Q5RL73 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RBM48Q5RL73 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RBM48Q5RL73 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RBM48Q5RL73 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RBM48Q5RL73 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RBM48Q5RL73 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.91■□□□□ 0.62
RBM48Q5RL73 MIR4508-201ENST00000584178 70 ntBASIC18.91■□□□□ 0.62
RBM48Q5RL73 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.91■□□□□ 0.62
RBM48Q5RL73 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RBM48Q5RL73 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RBM48Q5RL73 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
RBM48Q5RL73 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RBM48Q5RL73 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBM48Q5RL73 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RBM48Q5RL73 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RBM48Q5RL73 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RBM48Q5RL73 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RBM48Q5RL73 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.89■□□□□ 0.61
RBM48Q5RL73 Z92544.1-202ENST00000571933 1220 ntBASIC18.89■□□□□ 0.61
RBM48Q5RL73 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RBM48Q5RL73 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.89■□□□□ 0.61
RBM48Q5RL73 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RBM48Q5RL73 AC133637.1-201ENST00000624115 1537 ntBASIC18.89■□□□□ 0.61
RBM48Q5RL73 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RBM48Q5RL73 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RBM48Q5RL73 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RBM48Q5RL73 AP004607.7-201ENST00000527152 1677 ntBASIC18.89■□□□□ 0.61
RBM48Q5RL73 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBM48Q5RL73 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.88■□□□□ 0.61
RBM48Q5RL73 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBM48Q5RL73 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBM48Q5RL73 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.88■□□□□ 0.61
RBM48Q5RL73 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBM48Q5RL73 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBM48Q5RL73 AL451085.2-201ENST00000605085 799 ntBASIC18.88■□□□□ 0.61
RBM48Q5RL73 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RBM48Q5RL73 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBM48Q5RL73 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBM48Q5RL73 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBM48Q5RL73 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RBM48Q5RL73 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RBM48Q5RL73 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RBM48Q5RL73 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RBM48Q5RL73 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RBM48Q5RL73 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RBM48Q5RL73 TSPY13P-201ENST00000338964 914 ntBASIC18.87■□□□□ 0.61
RBM48Q5RL73 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.87■□□□□ 0.61
RBM48Q5RL73 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.87■□□□□ 0.61
RBM48Q5RL73 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.87■□□□□ 0.61
RBM48Q5RL73 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.87■□□□□ 0.61
RBM48Q5RL73 AC010141.3-201ENST00000456659 717 ntBASIC18.87■□□□□ 0.61
RBM48Q5RL73 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms