Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CHRNB3Q05901 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNB3Q05901 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRNB3Q05901 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB3Q05901 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CHRNB3Q05901 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB3Q05901 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHRNB3Q05901 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CHRNB3Q05901 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNB3Q05901 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNB3Q05901 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRNB3Q05901 DUX4L19-201ENST00000557448 1267 ntBASIC19.55■□□□□ 0.72
CHRNB3Q05901 AC092171.4-201ENST00000609130 632 ntBASIC19.55■□□□□ 0.72
CHRNB3Q05901 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.55■□□□□ 0.72
CHRNB3Q05901 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRNB3Q05901 AP006587.3-201ENST00000525742 1516 ntBASIC19.55■□□□□ 0.72
CHRNB3Q05901 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNB3Q05901 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNB3Q05901 AC020907.5-201ENST00000624372 1936 ntBASIC19.55■□□□□ 0.72
CHRNB3Q05901 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.54■□□□□ 0.72
CHRNB3Q05901 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CHRNB3Q05901 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB3Q05901 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB3Q05901 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.54■□□□□ 0.72
CHRNB3Q05901 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.54■□□□□ 0.72
CHRNB3Q05901 PBX2P1-201ENST00000493219 1291 ntBASIC19.54■□□□□ 0.72
CHRNB3Q05901 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.54■□□□□ 0.72
CHRNB3Q05901 AC010525.1-201ENST00000585559 441 ntBASIC19.54■□□□□ 0.72
CHRNB3Q05901 AC005837.3-201ENST00000612163 286 ntBASIC19.54■□□□□ 0.72
CHRNB3Q05901 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CHRNB3Q05901 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB3Q05901 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.54■□□□□ 0.72
CHRNB3Q05901 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB3Q05901 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.54■□□□□ 0.72
CHRNB3Q05901 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB3Q05901 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.54■□□□□ 0.72
CHRNB3Q05901 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB3Q05901 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHRNB3Q05901 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNB3Q05901 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB3Q05901 AC007225.1-201ENST00000566331 1836 ntBASIC19.53■□□□□ 0.72
CHRNB3Q05901 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.53■□□□□ 0.72
CHRNB3Q05901 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB3Q05901 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.53■□□□□ 0.72
CHRNB3Q05901 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB3Q05901 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB3Q05901 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB3Q05901 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHRNB3Q05901 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB3Q05901 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CHRNB3Q05901 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNB3Q05901 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CHRNB3Q05901 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRNB3Q05901 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
CHRNB3Q05901 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.52■□□□□ 0.72
CHRNB3Q05901 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNB3Q05901 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNB3Q05901 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNB3Q05901 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNB3Q05901 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNB3Q05901 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.52■□□□□ 0.72
CHRNB3Q05901 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNB3Q05901 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.52■□□□□ 0.72
CHRNB3Q05901 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNB3Q05901 UNC93B3-201ENST00000308076 687 ntBASIC19.52■□□□□ 0.72
CHRNB3Q05901 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.52■□□□□ 0.72
CHRNB3Q05901 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHRNB3Q05901 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.52■□□□□ 0.72
CHRNB3Q05901 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.52■□□□□ 0.72
CHRNB3Q05901 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.52■□□□□ 0.72
CHRNB3Q05901 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNB3Q05901 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.52■□□□□ 0.72
CHRNB3Q05901 AC106739.1-201ENST00000617035 715 ntBASIC19.52■□□□□ 0.72
CHRNB3Q05901 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNB3Q05901 RNF165-205ENST00000588679 2904 ntBASIC19.52■□□□□ 0.72
CHRNB3Q05901 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNB3Q05901 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHRNB3Q05901 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CHRNB3Q05901 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
CHRNB3Q05901 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
CHRNB3Q05901 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.52■□□□□ 0.71
CHRNB3Q05901 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHRNB3Q05901 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
CHRNB3Q05901 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CHRNB3Q05901 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CHRNB3Q05901 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.51■□□□□ 0.71
CHRNB3Q05901 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CHRNB3Q05901 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.51■□□□□ 0.71
CHRNB3Q05901 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CHRNB3Q05901 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNB3Q05901 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CHRNB3Q05901 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNB3Q05901 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.51■□□□□ 0.71
CHRNB3Q05901 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNB3Q05901 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.51■□□□□ 0.71
CHRNB3Q05901 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.51■□□□□ 0.71
CHRNB3Q05901 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNB3Q05901 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.51■□□□□ 0.71
CHRNB3Q05901 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHRNB3Q05901 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms