Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
GABRA4P48169 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.73■□□□□ 0.75
GABRA4P48169 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.73■□□□□ 0.75
GABRA4P48169 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.73■□□□□ 0.75
GABRA4P48169 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GABRA4P48169 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GABRA4P48169 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
GABRA4P48169 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GABRA4P48169 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
GABRA4P48169 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.72■□□□□ 0.75
GABRA4P48169 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.72■□□□□ 0.75
GABRA4P48169 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GABRA4P48169 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.72■□□□□ 0.75
GABRA4P48169 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
GABRA4P48169 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
GABRA4P48169 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.72■□□□□ 0.75
GABRA4P48169 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GABRA4P48169 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.72■□□□□ 0.75
GABRA4P48169 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.72■□□□□ 0.75
GABRA4P48169 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
GABRA4P48169 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.72■□□□□ 0.75
GABRA4P48169 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GABRA4P48169 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
GABRA4P48169 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
GABRA4P48169 AC116050.2-201ENST00000612102 1779 ntBASIC19.72■□□□□ 0.75
GABRA4P48169 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.72■□□□□ 0.75
GABRA4P48169 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.72■□□□□ 0.75
GABRA4P48169 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.71■□□□□ 0.75
GABRA4P48169 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.71■□□□□ 0.75
GABRA4P48169 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.71■□□□□ 0.75
GABRA4P48169 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
GABRA4P48169 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.71■□□□□ 0.75
GABRA4P48169 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.71■□□□□ 0.75
GABRA4P48169 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.71■□□□□ 0.75
GABRA4P48169 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GABRA4P48169 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
GABRA4P48169 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GABRA4P48169 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.7■□□□□ 0.74
GABRA4P48169 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GABRA4P48169 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.7■□□□□ 0.74
GABRA4P48169 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GABRA4P48169 AL355472.2-201ENST00000422958 438 ntBASIC19.7■□□□□ 0.74
GABRA4P48169 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.7■□□□□ 0.74
GABRA4P48169 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GABRA4P48169 CYP2T3P-201ENST00000601990 817 ntBASIC19.7■□□□□ 0.74
GABRA4P48169 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GABRA4P48169 MYC-209ENST00000641252 345 ntBASIC19.7■□□□□ 0.74
GABRA4P48169 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GABRA4P48169 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GABRA4P48169 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRA4P48169 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
GABRA4P48169 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.69■□□□□ 0.74
GABRA4P48169 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRA4P48169 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRA4P48169 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GABRA4P48169 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRA4P48169 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.69■□□□□ 0.74
GABRA4P48169 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.69■□□□□ 0.74
GABRA4P48169 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRA4P48169 KRT17P1-201ENST00000399211 1546 ntBASIC19.69■□□□□ 0.74
GABRA4P48169 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRA4P48169 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GABRA4P48169 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GABRA4P48169 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
GABRA4P48169 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GABRA4P48169 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GABRA4P48169 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.68■□□□□ 0.74
GABRA4P48169 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRA4P48169 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GABRA4P48169 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
GABRA4P48169 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRA4P48169 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
GABRA4P48169 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRA4P48169 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.68■□□□□ 0.74
GABRA4P48169 KRT18P6-201ENST00000555540 1265 ntBASIC19.68■□□□□ 0.74
GABRA4P48169 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRA4P48169 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRA4P48169 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
GABRA4P48169 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRA4P48169 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRA4P48169 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRA4P48169 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GABRA4P48169 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABRA4P48169 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GABRA4P48169 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GABRA4P48169 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GABRA4P48169 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
GABRA4P48169 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms