Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCND1P24385 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCND1P24385 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCND1P24385 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCND1P24385 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCND1P24385 IRS3P-201ENST00000223076 1006 ntBASIC20.77■□□□□ 0.92
CCND1P24385 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCND1P24385 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.77■□□□□ 0.92
CCND1P24385 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCND1P24385 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.77■□□□□ 0.92
CCND1P24385 AC012414.1-201ENST00000556676 535 ntBASIC20.77■□□□□ 0.92
CCND1P24385 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCND1P24385 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCND1P24385 AC009237.3-201ENST00000393279 1427 ntBASIC20.77■□□□□ 0.91
CCND1P24385 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCND1P24385 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.76■□□□□ 0.91
CCND1P24385 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCND1P24385 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCND1P24385 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCND1P24385 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCND1P24385 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCND1P24385 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCND1P24385 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CCND1P24385 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCND1P24385 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCND1P24385 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.76■□□□□ 0.91
CCND1P24385 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCND1P24385 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCND1P24385 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCND1P24385 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCND1P24385 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCND1P24385 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.75■□□□□ 0.91
CCND1P24385 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCND1P24385 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.75■□□□□ 0.91
CCND1P24385 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.75■□□□□ 0.91
CCND1P24385 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCND1P24385 BX005040.4-201ENST00000637145 1518 ntBASIC20.75■□□□□ 0.91
CCND1P24385 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.75■□□□□ 0.91
CCND1P24385 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCND1P24385 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCND1P24385 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCND1P24385 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.75■□□□□ 0.91
CCND1P24385 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCND1P24385 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.75■□□□□ 0.91
CCND1P24385 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.75■□□□□ 0.91
CCND1P24385 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CCND1P24385 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCND1P24385 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCND1P24385 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCND1P24385 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCND1P24385 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.74■□□□□ 0.91
CCND1P24385 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
CCND1P24385 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCND1P24385 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.74■□□□□ 0.91
CCND1P24385 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CCND1P24385 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCND1P24385 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CCND1P24385 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CCND1P24385 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.74■□□□□ 0.91
CCND1P24385 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.74■□□□□ 0.91
CCND1P24385 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCND1P24385 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCND1P24385 GABARAPL3-202ENST00000624044 1851 ntBASIC20.73■□□□□ 0.91
CCND1P24385 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCND1P24385 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCND1P24385 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
CCND1P24385 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CCND1P24385 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCND1P24385 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCND1P24385 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCND1P24385 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.73■□□□□ 0.91
CCND1P24385 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCND1P24385 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.73■□□□□ 0.91
CCND1P24385 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.73■□□□□ 0.91
CCND1P24385 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.73■□□□□ 0.91
CCND1P24385 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCND1P24385 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCND1P24385 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.73■□□□□ 0.91
CCND1P24385 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCND1P24385 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCND1P24385 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCND1P24385 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCND1P24385 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCND1P24385 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCND1P24385 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CCND1P24385 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCND1P24385 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCND1P24385 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms