Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATF1P18846 AC024257.2-201ENST00000549699 147 ntBASIC18.18■□□□□ 0.5
ATF1P18846 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATF1P18846 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.18■□□□□ 0.5
ATF1P18846 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.18■□□□□ 0.5
ATF1P18846 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ATF1P18846 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATF1P18846 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATF1P18846 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.18■□□□□ 0.5
ATF1P18846 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATF1P18846 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ATF1P18846 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ATF1P18846 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ATF1P18846 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATF1P18846 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ATF1P18846 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ATF1P18846 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.17■□□□□ 0.5
ATF1P18846 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.17■□□□□ 0.5
ATF1P18846 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ATF1P18846 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.17■□□□□ 0.5
ATF1P18846 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 AC112907.3-201ENST00000577781 2400 ntBASIC18.17■□□□□ 0.5
ATF1P18846 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.17■□□□□ 0.5
ATF1P18846 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ATF1P18846 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
ATF1P18846 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.17■□□□□ 0.5
ATF1P18846 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.17■□□□□ 0.5
ATF1P18846 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.17■□□□□ 0.5
ATF1P18846 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATF1P18846 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.16■□□□□ 0.5
ATF1P18846 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.16■□□□□ 0.5
ATF1P18846 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.16■□□□□ 0.5
ATF1P18846 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.16■□□□□ 0.5
ATF1P18846 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
ATF1P18846 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.16■□□□□ 0.5
ATF1P18846 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATF1P18846 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF1P18846 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ATF1P18846 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF1P18846 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.15■□□□□ 0.5
ATF1P18846 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.15■□□□□ 0.5
ATF1P18846 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF1P18846 AC007225.1-201ENST00000566331 1836 ntBASIC18.15■□□□□ 0.5
ATF1P18846 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ATF1P18846 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.15■□□□□ 0.5
ATF1P18846 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
ATF1P18846 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATF1P18846 IGHV3-19-201ENST00000521488 291 ntBASIC18.15■□□□□ 0.5
ATF1P18846 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATF1P18846 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
ATF1P18846 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.15■□□□□ 0.5
ATF1P18846 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ATF1P18846 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ATF1P18846 AC135279.3-201ENST00000610945 1311 ntBASIC18.15■□□□□ 0.5
ATF1P18846 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF1P18846 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF1P18846 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.15■□□□□ 0.5
ATF1P18846 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.15■□□□□ 0.5
ATF1P18846 AC121338.2-201ENST00000622535 1744 ntBASIC18.15■□□□□ 0.5
ATF1P18846 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF1P18846 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.14■□□□□ 0.5
ATF1P18846 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF1P18846 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.14■□□□□ 0.49
ATF1P18846 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF1P18846 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF1P18846 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.14■□□□□ 0.49
ATF1P18846 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATF1P18846 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.14■□□□□ 0.49
ATF1P18846 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.14■□□□□ 0.49
ATF1P18846 AC131212.1-201ENST00000613771 668 ntBASIC18.14■□□□□ 0.49
ATF1P18846 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.14■□□□□ 0.49
ATF1P18846 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.14■□□□□ 0.49
ATF1P18846 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms