Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.4■□□□□ 0.86
NELFEP18615 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.4■□□□□ 0.86
NELFEP18615 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.4■□□□□ 0.86
NELFEP18615 EEF1DP3-203ENST00000566025 782 ntBASIC20.4■□□□□ 0.86
NELFEP18615 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.4■□□□□ 0.86
NELFEP18615 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.4■□□□□ 0.86
NELFEP18615 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.4■□□□□ 0.86
NELFEP18615 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.4■□□□□ 0.86
NELFEP18615 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.4■□□□□ 0.86
NELFEP18615 MYCNOS-205ENST00000641950 531 ntBASIC20.4■□□□□ 0.86
NELFEP18615 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NELFEP18615 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
NELFEP18615 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NELFEP18615 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
NELFEP18615 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.39■□□□□ 0.86
NELFEP18615 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
NELFEP18615 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NELFEP18615 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NELFEP18615 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NELFEP18615 AC006970.2-201ENST00000450065 779 ntBASIC20.39■□□□□ 0.85
NELFEP18615 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.39■□□□□ 0.85
NELFEP18615 AC053503.5-201ENST00000601508 636 ntBASIC20.39■□□□□ 0.85
NELFEP18615 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.39■□□□□ 0.85
NELFEP18615 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NELFEP18615 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NELFEP18615 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NELFEP18615 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NELFEP18615 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.39■□□□□ 0.85
NELFEP18615 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.38■□□□□ 0.85
NELFEP18615 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NELFEP18615 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.38■□□□□ 0.85
NELFEP18615 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NELFEP18615 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.38■□□□□ 0.85
NELFEP18615 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NELFEP18615 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NELFEP18615 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NELFEP18615 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
NELFEP18615 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.38■□□□□ 0.85
NELFEP18615 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.38■□□□□ 0.85
NELFEP18615 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NELFEP18615 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NELFEP18615 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NELFEP18615 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
NELFEP18615 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.38■□□□□ 0.85
NELFEP18615 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.38■□□□□ 0.85
NELFEP18615 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.38■□□□□ 0.85
NELFEP18615 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NELFEP18615 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NELFEP18615 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.37■□□□□ 0.85
NELFEP18615 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.37■□□□□ 0.85
NELFEP18615 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.37■□□□□ 0.85
NELFEP18615 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 DUX4L16-201ENST00000555130 1264 ntBASIC20.37■□□□□ 0.85
NELFEP18615 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
NELFEP18615 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.37■□□□□ 0.85
NELFEP18615 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
NELFEP18615 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NELFEP18615 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NELFEP18615 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NELFEP18615 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NELFEP18615 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NELFEP18615 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NELFEP18615 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NELFEP18615 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
NELFEP18615 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NELFEP18615 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NELFEP18615 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NELFEP18615 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NELFEP18615 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.36■□□□□ 0.85
NELFEP18615 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NELFEP18615 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.36■□□□□ 0.85
NELFEP18615 AC231657.2-201ENST00000624556 255 ntBASIC20.36■□□□□ 0.85
NELFEP18615 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NELFEP18615 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NELFEP18615 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.36■□□□□ 0.85
NELFEP18615 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NELFEP18615 AF106564.1-201ENST00000607058 2553 ntBASIC20.36■□□□□ 0.85
NELFEP18615 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.35■□□□□ 0.85
NELFEP18615 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NELFEP18615 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
NELFEP18615 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
NELFEP18615 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NELFEP18615 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NELFEP18615 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.35■□□□□ 0.85
NELFEP18615 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NELFEP18615 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms