Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.74■□□□□ 0.75
CTSBP07858 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSBP07858 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSBP07858 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTSBP07858 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.74■□□□□ 0.75
CTSBP07858 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTSBP07858 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSBP07858 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTSBP07858 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.73■□□□□ 0.75
CTSBP07858 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.73■□□□□ 0.75
CTSBP07858 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.73■□□□□ 0.75
CTSBP07858 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSBP07858 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSBP07858 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSBP07858 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSBP07858 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSBP07858 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CTSBP07858 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSBP07858 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CTSBP07858 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTSBP07858 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.72■□□□□ 0.75
CTSBP07858 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.72■□□□□ 0.75
CTSBP07858 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSBP07858 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTSBP07858 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSBP07858 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSBP07858 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSBP07858 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.72■□□□□ 0.75
CTSBP07858 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSBP07858 AC069152.1-201ENST00000438030 544 ntBASIC19.72■□□□□ 0.75
CTSBP07858 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.72■□□□□ 0.75
CTSBP07858 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.72■□□□□ 0.75
CTSBP07858 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.72■□□□□ 0.75
CTSBP07858 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
CTSBP07858 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.72■□□□□ 0.75
CTSBP07858 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CTSBP07858 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.72■□□□□ 0.75
CTSBP07858 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSBP07858 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSBP07858 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CTSBP07858 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSBP07858 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSBP07858 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CTSBP07858 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CTSBP07858 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.71■□□□□ 0.75
CTSBP07858 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.71■□□□□ 0.75
CTSBP07858 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.71■□□□□ 0.75
CTSBP07858 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSBP07858 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSBP07858 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSBP07858 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.71■□□□□ 0.75
CTSBP07858 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSBP07858 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSBP07858 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSBP07858 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSBP07858 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.7■□□□□ 0.74
CTSBP07858 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CTSBP07858 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTSBP07858 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSBP07858 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSBP07858 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.7■□□□□ 0.74
CTSBP07858 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CTSBP07858 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.7■□□□□ 0.74
CTSBP07858 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.7■□□□□ 0.74
CTSBP07858 FAM21FP-204ENST00000608637 956 ntBASIC19.7■□□□□ 0.74
CTSBP07858 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.7■□□□□ 0.74
CTSBP07858 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSBP07858 KRT17P1-201ENST00000399211 1546 ntBASIC19.7■□□□□ 0.74
CTSBP07858 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.7■□□□□ 0.74
CTSBP07858 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSBP07858 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CTSBP07858 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.69■□□□□ 0.74
CTSBP07858 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSBP07858 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSBP07858 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSBP07858 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CTSBP07858 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.69■□□□□ 0.74
CTSBP07858 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.69■□□□□ 0.74
CTSBP07858 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.69■□□□□ 0.74
CTSBP07858 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.69■□□□□ 0.74
CTSBP07858 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSBP07858 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTSBP07858 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTSBP07858 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTSBP07858 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.69■□□□□ 0.74
CTSBP07858 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSBP07858 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSBP07858 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.68■□□□□ 0.74
CTSBP07858 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.68■□□□□ 0.74
CTSBP07858 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSBP07858 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSBP07858 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSBP07858 AC007322.3-201ENST00000426526 701 ntBASIC19.68■□□□□ 0.74
CTSBP07858 CDV3P1-201ENST00000471403 739 ntBASIC19.68■□□□□ 0.74
CTSBP07858 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.68■□□□□ 0.74
CTSBP07858 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.68■□□□□ 0.74
CTSBP07858 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.68■□□□□ 0.74
CTSBP07858 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTSBP07858 FEM1AP4-201ENST00000443167 1987 ntBASIC19.68■□□□□ 0.74
CTSBP07858 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms