Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHGBP05060 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.03■■□□□ 1.6
CHGBP05060 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.03■■□□□ 1.6
CHGBP05060 AC006970.2-201ENST00000450065 779 ntBASIC25.03■■□□□ 1.6
CHGBP05060 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.03■■□□□ 1.6
CHGBP05060 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
CHGBP05060 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25.03■■□□□ 1.6
CHGBP05060 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CHGBP05060 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHGBP05060 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
CHGBP05060 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC25.03■■□□□ 1.6
CHGBP05060 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.03■■□□□ 1.6
CHGBP05060 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.03■■□□□ 1.6
CHGBP05060 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHGBP05060 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.02■■□□□ 1.6
CHGBP05060 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CHGBP05060 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
CHGBP05060 NCF1B-203ENST00000435988 1254 ntBASIC25.02■■□□□ 1.6
CHGBP05060 AC245052.3-201ENST00000450182 901 ntBASIC25.02■■□□□ 1.6
CHGBP05060 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.02■■□□□ 1.6
CHGBP05060 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CHGBP05060 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHGBP05060 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.02■■□□□ 1.6
CHGBP05060 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHGBP05060 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.01■■□□□ 1.59
CHGBP05060 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CHGBP05060 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CHGBP05060 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.01■■□□□ 1.59
CHGBP05060 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHGBP05060 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
CHGBP05060 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.01■■□□□ 1.59
CHGBP05060 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHGBP05060 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHGBP05060 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CHGBP05060 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25■■□□□ 1.59
CHGBP05060 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHGBP05060 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
CHGBP05060 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25■■□□□ 1.59
CHGBP05060 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25■■□□□ 1.59
CHGBP05060 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC25■■□□□ 1.59
CHGBP05060 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHGBP05060 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25■■□□□ 1.59
CHGBP05060 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25■■□□□ 1.59
CHGBP05060 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25■■□□□ 1.59
CHGBP05060 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
CHGBP05060 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHGBP05060 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHGBP05060 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
CHGBP05060 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHGBP05060 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHGBP05060 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.99■■□□□ 1.59
CHGBP05060 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.99■■□□□ 1.59
CHGBP05060 AC083906.2-201ENST00000511578 360 ntBASIC24.99■■□□□ 1.59
CHGBP05060 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHGBP05060 AC104771.1-201ENST00000603335 964 ntBASIC24.99■■□□□ 1.59
CHGBP05060 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
CHGBP05060 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
CHGBP05060 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.99■■□□□ 1.59
CHGBP05060 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
CHGBP05060 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHGBP05060 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHGBP05060 PLK5-205ENST00000642079 1969 ntBASIC24.98■■□□□ 1.59
CHGBP05060 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHGBP05060 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHGBP05060 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CHGBP05060 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.98■■□□□ 1.59
CHGBP05060 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHGBP05060 ID1-201ENST00000376105 1233 ntBASIC24.98■■□□□ 1.59
CHGBP05060 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CHGBP05060 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHGBP05060 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.98■■□□□ 1.59
CHGBP05060 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.98■■□□□ 1.59
CHGBP05060 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHGBP05060 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHGBP05060 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHGBP05060 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHGBP05060 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHGBP05060 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHGBP05060 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CHGBP05060 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CHGBP05060 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CHGBP05060 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
CHGBP05060 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
CHGBP05060 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CHGBP05060 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CHGBP05060 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CHGBP05060 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.97■■□□□ 1.59
CHGBP05060 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
CHGBP05060 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.96■■□□□ 1.59
CHGBP05060 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.96■■□□□ 1.59
CHGBP05060 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.96■■□□□ 1.59
CHGBP05060 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CHGBP05060 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHGBP05060 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.96■■□□□ 1.59
CHGBP05060 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.96■■□□□ 1.59
CHGBP05060 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHGBP05060 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CHGBP05060 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.96■■□□□ 1.59
CHGBP05060 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.96■■□□□ 1.59
CHGBP05060 AC098934.4-201ENST00000564127 592 ntBASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms