Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLN5O75503 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CLN5O75503 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.82■□□□□ 0.28
CLN5O75503 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLN5O75503 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.82■□□□□ 0.28
CLN5O75503 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.82■□□□□ 0.28
CLN5O75503 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 AL356441.2-201ENST00000443009 864 ntBASIC16.82■□□□□ 0.28
CLN5O75503 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.82■□□□□ 0.28
CLN5O75503 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CLN5O75503 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.82■□□□□ 0.28
CLN5O75503 FEM1AP4-201ENST00000443167 1987 ntBASIC16.82■□□□□ 0.28
CLN5O75503 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CLN5O75503 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CLN5O75503 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CLN5O75503 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLN5O75503 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLN5O75503 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CLN5O75503 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLN5O75503 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.81■□□□□ 0.28
CLN5O75503 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLN5O75503 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLN5O75503 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLN5O75503 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.81■□□□□ 0.28
CLN5O75503 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.81■□□□□ 0.28
CLN5O75503 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.81■□□□□ 0.28
CLN5O75503 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.81■□□□□ 0.28
CLN5O75503 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.81■□□□□ 0.28
CLN5O75503 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLN5O75503 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLN5O75503 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLN5O75503 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLN5O75503 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.8■□□□□ 0.28
CLN5O75503 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLN5O75503 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.8■□□□□ 0.28
CLN5O75503 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLN5O75503 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
CLN5O75503 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLN5O75503 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLN5O75503 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLN5O75503 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLN5O75503 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLN5O75503 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLN5O75503 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLN5O75503 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLN5O75503 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLN5O75503 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLN5O75503 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.8■□□□□ 0.28
CLN5O75503 AC010141.3-201ENST00000456659 717 ntBASIC16.8■□□□□ 0.28
CLN5O75503 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.8■□□□□ 0.28
CLN5O75503 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLN5O75503 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLN5O75503 DUX4L19-201ENST00000557448 1267 ntBASIC16.8■□□□□ 0.28
CLN5O75503 AL138724.1-201ENST00000606771 1088 ntBASIC16.8■□□□□ 0.28
CLN5O75503 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.8■□□□□ 0.28
CLN5O75503 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLN5O75503 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLN5O75503 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
CLN5O75503 SYT6-210ENST00000641643 1587 ntBASIC16.8■□□□□ 0.28
CLN5O75503 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.79■□□□□ 0.28
CLN5O75503 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.79■□□□□ 0.28
CLN5O75503 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CLN5O75503 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLN5O75503 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLN5O75503 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLN5O75503 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.79■□□□□ 0.28
CLN5O75503 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.79■□□□□ 0.28
CLN5O75503 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLN5O75503 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.79■□□□□ 0.28
CLN5O75503 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLN5O75503 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.79■□□□□ 0.28
CLN5O75503 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.79■□□□□ 0.28
CLN5O75503 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLN5O75503 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CLN5O75503 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.79■□□□□ 0.28
CLN5O75503 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLN5O75503 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLN5O75503 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLN5O75503 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.79■□□□□ 0.28
CLN5O75503 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CLN5O75503 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms