Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZIC3O60481 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZIC3O60481 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZIC3O60481 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZIC3O60481 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ZIC3O60481 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZIC3O60481 AL512625.2-201ENST00000417533 625 ntBASIC18.73■□□□□ 0.59
ZIC3O60481 TSPY6P-201ENST00000448518 926 ntBASIC18.73■□□□□ 0.59
ZIC3O60481 CDV3P1-201ENST00000471403 739 ntBASIC18.73■□□□□ 0.59
ZIC3O60481 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZIC3O60481 FAM21FP-204ENST00000608637 956 ntBASIC18.73■□□□□ 0.59
ZIC3O60481 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
ZIC3O60481 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ZIC3O60481 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.73■□□□□ 0.59
ZIC3O60481 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZIC3O60481 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ZIC3O60481 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZIC3O60481 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZIC3O60481 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ZIC3O60481 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZIC3O60481 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZIC3O60481 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZIC3O60481 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.72■□□□□ 0.59
ZIC3O60481 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ZIC3O60481 GUSBP6-202ENST00000438529 1198 ntBASIC18.72■□□□□ 0.59
ZIC3O60481 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.72■□□□□ 0.59
ZIC3O60481 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.72■□□□□ 0.59
ZIC3O60481 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.72■□□□□ 0.59
ZIC3O60481 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZIC3O60481 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ZIC3O60481 AL049796.1-201ENST00000565336 1766 ntBASIC18.72■□□□□ 0.59
ZIC3O60481 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.72■□□□□ 0.59
ZIC3O60481 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZIC3O60481 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZIC3O60481 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZIC3O60481 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZIC3O60481 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ZIC3O60481 AC116050.2-201ENST00000612102 1779 ntBASIC18.71■□□□□ 0.59
ZIC3O60481 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZIC3O60481 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZIC3O60481 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
ZIC3O60481 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZIC3O60481 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.71■□□□□ 0.59
ZIC3O60481 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZIC3O60481 AC007322.3-201ENST00000426526 701 ntBASIC18.71■□□□□ 0.59
ZIC3O60481 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZIC3O60481 AC093787.1-201ENST00000450396 207 ntBASIC18.71■□□□□ 0.59
ZIC3O60481 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ZIC3O60481 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ZIC3O60481 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZIC3O60481 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZIC3O60481 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZIC3O60481 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZIC3O60481 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ZIC3O60481 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.7■□□□□ 0.58
ZIC3O60481 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZIC3O60481 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZIC3O60481 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZIC3O60481 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZIC3O60481 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.7■□□□□ 0.58
ZIC3O60481 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.7■□□□□ 0.58
ZIC3O60481 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ZIC3O60481 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
ZIC3O60481 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.7■□□□□ 0.58
ZIC3O60481 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.7■□□□□ 0.58
ZIC3O60481 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.7■□□□□ 0.58
ZIC3O60481 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.7■□□□□ 0.58
ZIC3O60481 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ZIC3O60481 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZIC3O60481 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.7■□□□□ 0.58
ZIC3O60481 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZIC3O60481 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ZIC3O60481 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.7■□□□□ 0.58
ZIC3O60481 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZIC3O60481 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ZIC3O60481 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.69■□□□□ 0.58
ZIC3O60481 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZIC3O60481 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.69■□□□□ 0.58
ZIC3O60481 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZIC3O60481 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ZIC3O60481 AF106564.1-201ENST00000607058 2553 ntBASIC18.69■□□□□ 0.58
ZIC3O60481 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZIC3O60481 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.69■□□□□ 0.58
ZIC3O60481 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ZIC3O60481 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZIC3O60481 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZIC3O60481 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZIC3O60481 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZIC3O60481 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZIC3O60481 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.68■□□□□ 0.58
ZIC3O60481 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
ZIC3O60481 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZIC3O60481 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.68■□□□□ 0.58
ZIC3O60481 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.68■□□□□ 0.58
ZIC3O60481 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
ZIC3O60481 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ZIC3O60481 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZIC3O60481 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ZIC3O60481 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZIC3O60481 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms