Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SMAD6O43541 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.03■□□□□ 0.96
SMAD6O43541 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SMAD6O43541 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.03■□□□□ 0.96
SMAD6O43541 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMAD6O43541 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMAD6O43541 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SMAD6O43541 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMAD6O43541 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.03■□□□□ 0.96
SMAD6O43541 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
SMAD6O43541 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.03■□□□□ 0.96
SMAD6O43541 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.03■□□□□ 0.96
SMAD6O43541 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.03■□□□□ 0.96
SMAD6O43541 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMAD6O43541 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SMAD6O43541 AC010980.2-201ENST00000587099 1412 ntBASIC21.03■□□□□ 0.96
SMAD6O43541 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMAD6O43541 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMAD6O43541 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
SMAD6O43541 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.02■□□□□ 0.96
SMAD6O43541 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMAD6O43541 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMAD6O43541 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMAD6O43541 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
SMAD6O43541 CDV3P1-201ENST00000471403 739 ntBASIC21.02■□□□□ 0.96
SMAD6O43541 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.02■□□□□ 0.96
SMAD6O43541 AC098934.4-201ENST00000564127 592 ntBASIC21.02■□□□□ 0.96
SMAD6O43541 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.02■□□□□ 0.96
SMAD6O43541 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.02■□□□□ 0.96
SMAD6O43541 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.02■□□□□ 0.96
SMAD6O43541 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMAD6O43541 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMAD6O43541 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMAD6O43541 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMAD6O43541 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.02■□□□□ 0.95
SMAD6O43541 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD6O43541 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SMAD6O43541 MIPEPP3-201ENST00000412105 444 ntBASIC21.01■□□□□ 0.95
SMAD6O43541 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.01■□□□□ 0.95
SMAD6O43541 FAM21FP-204ENST00000608637 956 ntBASIC21.01■□□□□ 0.95
SMAD6O43541 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD6O43541 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD6O43541 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.01■□□□□ 0.95
SMAD6O43541 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD6O43541 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD6O43541 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.01■□□□□ 0.95
SMAD6O43541 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD6O43541 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMAD6O43541 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMAD6O43541 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21■□□□□ 0.95
SMAD6O43541 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMAD6O43541 AC007322.3-201ENST00000426526 701 ntBASIC21■□□□□ 0.95
SMAD6O43541 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21■□□□□ 0.95
SMAD6O43541 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMAD6O43541 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMAD6O43541 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21■□□□□ 0.95
SMAD6O43541 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SMAD6O43541 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SMAD6O43541 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SMAD6O43541 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SMAD6O43541 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.99■□□□□ 0.95
SMAD6O43541 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SMAD6O43541 AC116050.2-201ENST00000612102 1779 ntBASIC20.99■□□□□ 0.95
SMAD6O43541 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
SMAD6O43541 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SMAD6O43541 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMAD6O43541 AF106564.1-201ENST00000607058 2553 ntBASIC20.98■□□□□ 0.95
SMAD6O43541 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SMAD6O43541 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.98■□□□□ 0.95
SMAD6O43541 FEM1AP4-201ENST00000443167 1987 ntBASIC20.98■□□□□ 0.95
SMAD6O43541 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD6O43541 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.98■□□□□ 0.95
SMAD6O43541 BX276092.2-201ENST00000417668 665 ntBASIC20.98■□□□□ 0.95
SMAD6O43541 AL355472.2-201ENST00000422958 438 ntBASIC20.98■□□□□ 0.95
SMAD6O43541 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.98■□□□□ 0.95
SMAD6O43541 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.98■□□□□ 0.95
SMAD6O43541 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.98■□□□□ 0.95
SMAD6O43541 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD6O43541 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD6O43541 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.98■□□□□ 0.95
SMAD6O43541 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SMAD6O43541 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD6O43541 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMAD6O43541 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD6O43541 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD6O43541 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.97■□□□□ 0.95
SMAD6O43541 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMAD6O43541 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms