Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.25■■□□□ 1.15
SPTLC1O15269 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.25■■□□□ 1.15
SPTLC1O15269 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.25■■□□□ 1.15
SPTLC1O15269 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.24■■□□□ 1.15
SPTLC1O15269 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPTLC1O15269 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPTLC1O15269 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPTLC1O15269 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPTLC1O15269 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
SPTLC1O15269 MIPEPP3-201ENST00000412105 444 ntBASIC22.24■■□□□ 1.15
SPTLC1O15269 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.24■■□□□ 1.15
SPTLC1O15269 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.24■■□□□ 1.15
SPTLC1O15269 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.24■■□□□ 1.15
SPTLC1O15269 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC22.24■■□□□ 1.15
SPTLC1O15269 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPTLC1O15269 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPTLC1O15269 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPTLC1O15269 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPTLC1O15269 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
SPTLC1O15269 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
SPTLC1O15269 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.23■■□□□ 1.15
SPTLC1O15269 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SPTLC1O15269 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
SPTLC1O15269 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.23■■□□□ 1.15
SPTLC1O15269 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.23■■□□□ 1.15
SPTLC1O15269 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
SPTLC1O15269 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SPTLC1O15269 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SPTLC1O15269 AC010980.2-201ENST00000587099 1412 ntBASIC22.23■■□□□ 1.15
SPTLC1O15269 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SPTLC1O15269 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SPTLC1O15269 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SPTLC1O15269 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
SPTLC1O15269 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SPTLC1O15269 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SPTLC1O15269 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SPTLC1O15269 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.22■■□□□ 1.15
SPTLC1O15269 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.22■■□□□ 1.15
SPTLC1O15269 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SPTLC1O15269 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SPTLC1O15269 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.22■■□□□ 1.15
SPTLC1O15269 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SPTLC1O15269 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SPTLC1O15269 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SPTLC1O15269 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SPTLC1O15269 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SPTLC1O15269 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.21■■□□□ 1.15
SPTLC1O15269 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SPTLC1O15269 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.21■■□□□ 1.15
SPTLC1O15269 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.21■■□□□ 1.15
SPTLC1O15269 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.21■■□□□ 1.15
SPTLC1O15269 FAM21FP-204ENST00000608637 956 ntBASIC22.21■■□□□ 1.15
SPTLC1O15269 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SPTLC1O15269 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SPTLC1O15269 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
SPTLC1O15269 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SPTLC1O15269 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SPTLC1O15269 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SPTLC1O15269 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SPTLC1O15269 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
SPTLC1O15269 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SPTLC1O15269 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
SPTLC1O15269 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SPTLC1O15269 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.2■■□□□ 1.14
SPTLC1O15269 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.2■■□□□ 1.14
SPTLC1O15269 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SPTLC1O15269 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
SPTLC1O15269 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
SPTLC1O15269 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SPTLC1O15269 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SPTLC1O15269 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SPTLC1O15269 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SPTLC1O15269 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SPTLC1O15269 AC069152.1-201ENST00000438030 544 ntBASIC22.19■■□□□ 1.14
SPTLC1O15269 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.19■■□□□ 1.14
SPTLC1O15269 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.19■■□□□ 1.14
SPTLC1O15269 AC093827.2-201ENST00000512654 315 ntBASIC22.19■■□□□ 1.14
SPTLC1O15269 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.19■■□□□ 1.14
SPTLC1O15269 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.19■■□□□ 1.14
SPTLC1O15269 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.19■■□□□ 1.14
SPTLC1O15269 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.19■■□□□ 1.14
SPTLC1O15269 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
SPTLC1O15269 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.19■■□□□ 1.14
SPTLC1O15269 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.19■■□□□ 1.14
SPTLC1O15269 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SPTLC1O15269 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SPTLC1O15269 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SPTLC1O15269 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPTLC1O15269 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPTLC1O15269 AC079834.2-201ENST00000609776 1949 ntBASIC22.18■■□□□ 1.14
SPTLC1O15269 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPTLC1O15269 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SPTLC1O15269 BX276092.2-201ENST00000417668 665 ntBASIC22.18■■□□□ 1.14
SPTLC1O15269 AL355472.2-201ENST00000422958 438 ntBASIC22.18■■□□□ 1.14
SPTLC1O15269 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.18■■□□□ 1.14
SPTLC1O15269 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.18■■□□□ 1.14
SPTLC1O15269 FAM201B-201ENST00000458407 597 ntBASIC22.18■■□□□ 1.14
SPTLC1O15269 CDV3P1-201ENST00000471403 739 ntBASIC22.18■■□□□ 1.14
SPTLC1O15269 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SPTLC1O15269 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms