Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPEO14579 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPEO14579 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPEO14579 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.7■□□□□ 0.9
COPEO14579 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.7■□□□□ 0.9
COPEO14579 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.7■□□□□ 0.9
COPEO14579 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.7■□□□□ 0.9
COPEO14579 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
COPEO14579 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.7■□□□□ 0.9
COPEO14579 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
COPEO14579 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.7■□□□□ 0.9
COPEO14579 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COPEO14579 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPEO14579 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPEO14579 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPEO14579 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COPEO14579 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPEO14579 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COPEO14579 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.69■□□□□ 0.9
COPEO14579 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.69■□□□□ 0.9
COPEO14579 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.69■□□□□ 0.9
COPEO14579 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.69■□□□□ 0.9
COPEO14579 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.69■□□□□ 0.9
COPEO14579 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COPEO14579 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.69■□□□□ 0.9
COPEO14579 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
COPEO14579 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 AC009237.3-201ENST00000393279 1427 ntBASIC20.69■□□□□ 0.9
COPEO14579 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 FP700111.2-201ENST00000619190 1892 ntBASIC20.69■□□□□ 0.9
COPEO14579 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPEO14579 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COPEO14579 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.68■□□□□ 0.9
COPEO14579 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
COPEO14579 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.68■□□□□ 0.9
COPEO14579 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
COPEO14579 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COPEO14579 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.68■□□□□ 0.9
COPEO14579 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COPEO14579 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COPEO14579 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
COPEO14579 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COPEO14579 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPEO14579 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COPEO14579 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COPEO14579 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
COPEO14579 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COPEO14579 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COPEO14579 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
COPEO14579 AC133561.4-201ENST00000566112 224 ntBASIC20.67■□□□□ 0.9
COPEO14579 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.67■□□□□ 0.9
COPEO14579 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COPEO14579 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.67■□□□□ 0.9
COPEO14579 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.67■□□□□ 0.9
COPEO14579 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COPEO14579 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.67■□□□□ 0.9
COPEO14579 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.67■□□□□ 0.9
COPEO14579 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.67■□□□□ 0.9
COPEO14579 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPEO14579 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPEO14579 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.66■□□□□ 0.9
COPEO14579 AC055733.4-201ENST00000638462 1354 ntBASIC20.66■□□□□ 0.9
COPEO14579 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms