Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN4O14493 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN4O14493 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.54■□□□□ 0.72
CLDN4O14493 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLDN4O14493 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN4O14493 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN4O14493 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLDN4O14493 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.54■□□□□ 0.72
CLDN4O14493 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.54■□□□□ 0.72
CLDN4O14493 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CLDN4O14493 AC073111.5-205ENST00000641717 521 ntBASIC19.54■□□□□ 0.72
CLDN4O14493 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CLDN4O14493 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN4O14493 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN4O14493 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN4O14493 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN4O14493 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN4O14493 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN4O14493 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN4O14493 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN4O14493 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLDN4O14493 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN4O14493 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN4O14493 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.53■□□□□ 0.72
CLDN4O14493 AC026185.1-201ENST00000445748 174 ntBASIC19.53■□□□□ 0.72
CLDN4O14493 AC007322.4-201ENST00000509611 723 ntBASIC19.53■□□□□ 0.72
CLDN4O14493 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.53■□□□□ 0.72
CLDN4O14493 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CLDN4O14493 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN4O14493 AL591742.1-201ENST00000604433 565 ntBASIC19.53■□□□□ 0.72
CLDN4O14493 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLDN4O14493 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLDN4O14493 AL024507.2-201ENST00000606070 2574 ntBASIC19.53■□□□□ 0.72
CLDN4O14493 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.53■□□□□ 0.72
CLDN4O14493 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN4O14493 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CLDN4O14493 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CLDN4O14493 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN4O14493 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN4O14493 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLDN4O14493 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLDN4O14493 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CLDN4O14493 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN4O14493 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN4O14493 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN4O14493 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.52■□□□□ 0.72
CLDN4O14493 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN4O14493 CDCA4P2-201ENST00000441182 718 ntBASIC19.52■□□□□ 0.72
CLDN4O14493 CDV3P1-201ENST00000471403 739 ntBASIC19.52■□□□□ 0.72
CLDN4O14493 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN4O14493 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN4O14493 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN4O14493 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLDN4O14493 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CLDN4O14493 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CLDN4O14493 FEM1AP4-201ENST00000443167 1987 ntBASIC19.52■□□□□ 0.71
CLDN4O14493 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CLDN4O14493 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN4O14493 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN4O14493 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN4O14493 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLDN4O14493 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDN4O14493 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDN4O14493 AL049796.1-201ENST00000565336 1766 ntBASIC19.51■□□□□ 0.71
CLDN4O14493 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CLDN4O14493 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN4O14493 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.51■□□□□ 0.71
CLDN4O14493 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN4O14493 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN4O14493 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN4O14493 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN4O14493 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLDN4O14493 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.51■□□□□ 0.71
CLDN4O14493 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLDN4O14493 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN4O14493 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN4O14493 AC026310.3-201ENST00000625186 2373 ntBASIC19.5■□□□□ 0.71
CLDN4O14493 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN4O14493 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN4O14493 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN4O14493 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN4O14493 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN4O14493 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLDN4O14493 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN4O14493 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN4O14493 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.5■□□□□ 0.71
CLDN4O14493 AC091799.1-201ENST00000422823 811 ntBASIC19.5■□□□□ 0.71
CLDN4O14493 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.5■□□□□ 0.71
CLDN4O14493 AL162412.1-201ENST00000567129 965 ntBASIC19.5■□□□□ 0.71
CLDN4O14493 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN4O14493 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLDN4O14493 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN4O14493 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLDN4O14493 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLDN4O14493 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN4O14493 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN4O14493 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN4O14493 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN4O14493 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.49■□□□□ 0.71
CLDN4O14493 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms