Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 OR6D1P-202ENST00000641007 5290 ntBASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ZNRF2P2-203ENST00000454624 420 ntBASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC022616.5-201ENST00000518796 181 ntBASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 REST-206ENST00000612429 1376 ntTSL 5 BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 REST-207ENST00000616975 1370 ntTSL 5 BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 AC120498.9-201ENST00000339021 3867 ntBASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM256-PLSCR3K7ERE1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 AC027702.1-201ENST00000563810 1770 ntBASIC13.15□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 LONRF2P2-201ENST00000439212 571 ntBASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 PKD1P1-201ENST00000458669 6805 ntBASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 AC133552.2-201ENST00000619106 1032 ntBASIC13.13□□□□□ -0.31
TMEM256-PLSCR3K7ERE1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms