Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRAV5A0A0B4J249 RNF165-205ENST00000588679 2904 ntBASIC16.08■□□□□ 0.17
TRAV5A0A0B4J249 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV5A0A0B4J249 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TRAV5A0A0B4J249 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.08■□□□□ 0.17
TRAV5A0A0B4J249 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
TRAV5A0A0B4J249 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV5A0A0B4J249 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV5A0A0B4J249 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV5A0A0B4J249 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 AC011298.3-201ENST00000615796 283 ntBASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 FP700111.2-201ENST00000619190 1892 ntBASIC16.08■□□□□ 0.16
TRAV5A0A0B4J249 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV5A0A0B4J249 AL512408.1-201ENST00000569378 2000 ntBASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV5A0A0B4J249 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV5A0A0B4J249 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV5A0A0B4J249 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms