Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC104791.2-201ENST00000623323 2525 ntBASIC9.08□□□□□ -0.96
P04436 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC9.08□□□□□ -0.96
P04436 EPSTI1-201ENST00000313624 3114 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
P04436 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
P04436 CXorf57-202ENST00000372548 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
P04436 TCP11L1-202ENST00000432887 2633 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
P04436 STARD6-203ENST00000581310 1371 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
P04436 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC9.08□□□□□ -0.96
P04436 R3HDM2-202ENST00000358907 3974 ntAPPRIS P2 TSL 5 BASIC9.08□□□□□ -0.96
P04436 CALCOCO1-202ENST00000430117 2706 ntTSL 5 BASIC9.08□□□□□ -0.96
P04436 TXNL4B-202ENST00000423037 2490 ntAPPRIS P1 TSL 4 BASIC9.08□□□□□ -0.96
P04436 MARCH6-208ENST00000510792 1963 ntTSL 2 BASIC9.08□□□□□ -0.96
P04436 FBXO47-201ENST00000378079 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
P04436 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
P04436 ADD2-205ENST00000413157 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
P04436 CBX5-202ENST00000439541 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
P04436 AL138847.2-201ENST00000624477 1819 ntBASIC9.08□□□□□ -0.96
P04436 TRMO-207ENST00000611338 3635 ntTSL 5 BASIC9.07□□□□□ -0.96
P04436 AC011095.1-201ENST00000584677 2794 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 STAU2-215ENST00000521727 3953 ntTSL 5 BASIC9.07□□□□□ -0.96
P04436 MDH1-216ENST00000544381 1346 ntTSL 2 BASIC9.07□□□□□ -0.96
P04436 KLHL30-AS1-201ENST00000623136 3106 ntBASIC9.07□□□□□ -0.96
P04436 SSPN-202ENST00000422622 4348 ntTSL 2 BASIC9.07□□□□□ -0.96
P04436 USP28-201ENST00000003302 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 RCAN1-214ENST00000620920 2257 ntTSL 4 BASIC9.07□□□□□ -0.96
P04436 PPP4R1-203ENST00000400556 3925 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 AL121929.2-201ENST00000609691 1432 ntBASIC9.07□□□□□ -0.96
P04436 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
P04436 COL12A1-201ENST00000322507 11723 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 CDH18-202ENST00000382275 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
P04436 OLA1P3-201ENST00000550756 2555 ntBASIC9.07□□□□□ -0.96
P04436 VPS8-207ENST00000436792 5011 ntAPPRIS ALT1 TSL 2 BASIC9.07□□□□□ -0.96
P04436 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 OGDHL-203ENST00000432695 3383 ntTSL 2 BASIC9.07□□□□□ -0.96
P04436 SLAMF1-201ENST00000235739 883 ntTSL 5 BASIC9.07□□□□□ -0.96
P04436 GSTM2-203ENST00000369829 914 ntTSL 3 BASIC9.07□□□□□ -0.96
P04436 MCTS1-201ENST00000371315 1130 ntTSL 2 BASIC9.07□□□□□ -0.96
P04436 IGLV2-18-201ENST00000390310 367 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
P04436 Z83839.1-201ENST00000423412 630 ntBASIC9.07□□□□□ -0.96
P04436 LINC01803-201ENST00000438659 613 ntTSL 2 BASIC9.07□□□□□ -0.96
P04436 KRTAP19-10P-201ENST00000445258 187 ntBASIC9.07□□□□□ -0.96
P04436 RPSAP23-201ENST00000446095 883 ntBASIC9.07□□□□□ -0.96
P04436 AL135924.1-201ENST00000446146 423 ntBASIC9.07□□□□□ -0.96
P04436 AL157392.2-201ENST00000449462 474 ntTSL 3 BASIC9.07□□□□□ -0.96
P04436 RN7SL361P-201ENST00000470785 298 ntBASIC9.07□□□□□ -0.96
P04436 LINC02082-201ENST00000484765 710 ntTSL 2 BASIC9.07□□□□□ -0.96
P04436 AC025437.6-201ENST00000518624 935 ntBASIC9.07□□□□□ -0.96
P04436 LIPM-202ENST00000539337 1197 ntTSL 2 BASIC9.07□□□□□ -0.96
P04436 FAM174B-204ENST00000555064 621 ntAPPRIS ALT2 TSL 4 BASIC9.07□□□□□ -0.96
P04436 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC9.07□□□□□ -0.96
P04436 AC009088.1-201ENST00000565152 833 ntBASIC9.07□□□□□ -0.96
P04436 AC006441.4-201ENST00000583161 636 ntTSL 3 BASIC9.07□□□□□ -0.96
P04436 LYPLA2P2-201ENST00000600506 676 ntBASIC9.07□□□□□ -0.96
P04436 Z73429.1-201ENST00000610170 345 ntBASIC9.07□□□□□ -0.96
P04436 PPARGC1A-216ENST00000612355 936 ntTSL 5 BASIC9.07□□□□□ -0.96
P04436 FAM74A4-202ENST00000618177 469 ntBASIC9.07□□□□□ -0.96
P04436 TTC38-207ENST00000629918 162 ntTSL 5 BASIC9.07□□□□□ -0.96
P04436 RFX2-202ENST00000359161 3595 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 LINC01965-201ENST00000412112 1378 ntTSL 3 BASIC9.07□□□□□ -0.96
P04436 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 NLRP1-203ENST00000345221 4656 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
P04436 AC243967.3-201ENST00000614316 2265 ntBASIC9.07□□□□□ -0.96
P04436 NR2C2-202ENST00000393102 1937 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
P04436 TRPV1-202ENST00000399756 4068 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 USP17L12-201ENST00000415041 1593 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
P04436 USP17L21-201ENST00000506414 1593 ntAPPRIS P2 BASIC9.07□□□□□ -0.96
P04436 FCGR2B-202ENST00000358671 2115 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 PARP6-223ENST00000616176 2102 ntTSL 5 BASIC9.07□□□□□ -0.96
P04436 FLJ22447-201ENST00000229465 1655 ntTSL 2 BASIC9.07□□□□□ -0.96
P04436 GUCY1B3-201ENST00000264424 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
P04436 SLC6A2-203ENST00000414754 3201 ntTSL 5 BASIC9.07□□□□□ -0.96
P04436 TMCO4-201ENST00000294543 2974 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 LINC01936-201ENST00000421976 2952 ntTSL 4 BASIC9.06□□□□□ -0.96
P04436 IFT122-210ENST00000504021 3541 ntTSL 2 BASIC9.06□□□□□ -0.96
P04436 WSCD2-207ENST00000549903 3534 ntTSL 5 BASIC9.06□□□□□ -0.96
P04436 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
P04436 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
P04436 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
P04436 NCAPD3-214ENST00000534548 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 ZNF195-205ENST00000399602 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 IGSF9B-201ENST00000321016 4050 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
P04436 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
P04436 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC9.06□□□□□ -0.96
P04436 RTCB-201ENST00000216038 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 L3MBTL4-AS1-201ENST00000578427 2044 ntTSL 5 BASIC9.06□□□□□ -0.96
P04436 EPB41L2-201ENST00000337057 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 SLN-201ENST00000305991 722 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 C6orf58-201ENST00000329722 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 PAGE1-201ENST00000376150 665 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 UQCR10-202ENST00000401406 584 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
P04436 DYNC2LI1-204ENST00000406852 1133 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 537.4 ms