RNA–Protein interactions for RNA: ENST00000400249.6

DEPDC5-206, Transcript of DEP domain containing 5, humanhuman

TSL 5 BASIC

Gene DEPDC5, Length 5,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-206ENST00000400249 DCAF8L2P0C7V8 631 aa16.8■□□□□ 0.28
DEPDC5-206ENST00000400249 NISCHQ9Y2I1 1504 aa16.47■□□□□ 0.23
DEPDC5-206ENST00000400249 FAM9AQ8IZU1 332 aaPredicted RBP15.18■□□□□ 0.02
DEPDC5-206ENST00000400249 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
DEPDC5-206ENST00000400249 SUPT5HO00267 1087 aaKnown RBP15.02■□□□□ -0
DEPDC5-206ENST00000400249 SHROOM4Q9ULL8 1493 aa14.84□□□□□ -0.03
DEPDC5-206ENST00000400249 APLP2Q06481 763 aa14.84□□□□□ -0.03
DEPDC5-206ENST00000400249 EHMT2Q96KQ7 1210 aa14.81□□□□□ -0.04
DEPDC5-206ENST00000400249 ABCC9O60706 1549 aa14.62□□□□□ -0.07
DEPDC5-206ENST00000400249 ERICH6Q7L0X2 663 aa14.46□□□□□ -0.09
DEPDC5-206ENST00000400249 CCER1Q8TC90 406 aaPredicted RBP14.44□□□□□ -0.1
DEPDC5-206ENST00000400249 PABPN1Q86U42 306 aaKnown RBP eCLIP14.35□□□□□ -0.11
DEPDC5-206ENST00000400249 TTBK1Q5TCY1 1321 aaPredicted RBP14.31□□□□□ -0.12
DEPDC5-206ENST00000400249 ATP1B4Q9UN42 357 aaPredicted RBP14.28□□□□□ -0.12
DEPDC5-206ENST00000400249 RANGAP1P46060 587 aaPredicted RBP14.23□□□□□ -0.13
DEPDC5-206ENST00000400249 MYT1LQ9UL68 1186 aa14.2□□□□□ -0.14
DEPDC5-206ENST00000400249 PCGF6Q9BYE7 350 aa14.17□□□□□ -0.14
DEPDC5-206ENST00000400249 CENPBP07199 599 aaPredicted RBP14.16□□□□□ -0.14
DEPDC5-206ENST00000400249 NEFLP07196 543 aa14.09□□□□□ -0.15
DEPDC5-206ENST00000400249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.08□□□□□ -0.16
DEPDC5-206ENST00000400249 HNRNPUL2Q1KMD3 747 aaKnown RBP14.08□□□□□ -0.16
DEPDC5-206ENST00000400249 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
DEPDC5-206ENST00000400249 FBLN2P98095 1184 aa13.96□□□□□ -0.17
DEPDC5-206ENST00000400249 UBTFP17480 764 aaKnown RBP13.95□□□□□ -0.18
DEPDC5-206ENST00000400249 ZEB1P37275 1124 aaPredicted RBP13.95□□□□□ -0.18
DEPDC5-206ENST00000400249 DAXXQ9UER7 740 aaPredicted RBP13.9□□□□□ -0.18
DEPDC5-206ENST00000400249 ZCCHC6Q5VYS8 1495 aaKnown RBP13.89□□□□□ -0.19
DEPDC5-206ENST00000400249 YTHDC1Q96MU7 727 aaKnown RBP13.77□□□□□ -0.21
DEPDC5-206ENST00000400249 POLR3GLQ9BT43 218 aa13.77□□□□□ -0.21
DEPDC5-206ENST00000400249 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
DEPDC5-206ENST00000400249 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
DEPDC5-206ENST00000400249 CHIC1Q5VXU3 224 aa13.68□□□□□ -0.22
DEPDC5-206ENST00000400249 MYT1Q01538 1121 aa13.67□□□□□ -0.22
DEPDC5-206ENST00000400249 SLC4A1APQ9BWU0 796 aaKnown RBP13.67□□□□□ -0.22
DEPDC5-206ENST00000400249 RB1CC1Q8TDY2 1594 aa13.61□□□□□ -0.23
DEPDC5-206ENST00000400249 ESF1Q9H501 851 aaKnown RBP13.61□□□□□ -0.23
DEPDC5-206ENST00000400249 ITGAEP38570 1179 aa13.58□□□□□ -0.24
DEPDC5-206ENST00000400249 CNGB1Q14028 1251 aaPredicted RBP13.56□□□□□ -0.24
DEPDC5-206ENST00000400249 CLSPNQ9HAW4 1339 aa13.54□□□□□ -0.24
DEPDC5-206ENST00000400249 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
DEPDC5-206ENST00000400249 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
DEPDC5-206ENST00000400249 ERCC6Q03468 1493 aa13.49□□□□□ -0.25
DEPDC5-206ENST00000400249 ZNF316A6NFI3 1004 aaPredicted RBP13.48□□□□□ -0.25
DEPDC5-206ENST00000400249 PPARGC1BQ86YN6 1023 aaKnown RBP13.48□□□□□ -0.25
DEPDC5-206ENST00000400249 TRHP20396 242 aaPredicted RBP13.43□□□□□ -0.26
DEPDC5-206ENST00000400249 BCANQ96GW7 911 aa13.4□□□□□ -0.26
DEPDC5-206ENST00000400249 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
DEPDC5-206ENST00000400249 RTL5Q5HYW3 569 aaPredicted RBP13.39□□□□□ -0.27
DEPDC5-206ENST00000400249 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
DEPDC5-206ENST00000400249 PLPPR3Q6T4P5 718 aa13.36□□□□□ -0.27
DEPDC5-206ENST00000400249 CDK11AQ9UQ88 783 aaPredicted RBP13.33□□□□□ -0.28
DEPDC5-206ENST00000400249 NACADO15069 1562 aa13.32□□□□□ -0.28
DEPDC5-206ENST00000400249 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
DEPDC5-206ENST00000400249 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
DEPDC5-206ENST00000400249 TRIM26Q12899 539 aaPredicted RBP13.28□□□□□ -0.28
DEPDC5-206ENST00000400249 TRIM52Q96A61 297 aa13.23□□□□□ -0.29
DEPDC5-206ENST00000400249 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
DEPDC5-206ENST00000400249 AEBP2Q6ZN18 517 aaPredicted RBP13.21□□□□□ -0.29
DEPDC5-206ENST00000400249 NEFMP07197 916 aa13.2□□□□□ -0.3
DEPDC5-206ENST00000400249 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
DEPDC5-206ENST00000400249 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
DEPDC5-206ENST00000400249 FAM50AQ14320 339 aaKnown RBP13.17□□□□□ -0.3
DEPDC5-206ENST00000400249 BCL11AQ9H165 835 aa13.16□□□□□ -0.3
DEPDC5-206ENST00000400249 HRCP23327 699 aa13.15□□□□□ -0.3
DEPDC5-206ENST00000400249 ARID4BQ4LE39 1312 aaPredicted RBP13.14□□□□□ -0.31
DEPDC5-206ENST00000400249 ZNF777Q9ULD5 760 aaPredicted RBP13.12□□□□□ -0.31
DEPDC5-206ENST00000400249 CANXP27824 592 aaKnown RBP13.12□□□□□ -0.31
DEPDC5-206ENST00000400249 ZNF326Q5BKZ1 582 aaKnown RBP13.12□□□□□ -0.31
DEPDC5-206ENST00000400249 LOC105371045A0A1W2PR82 267 aa13.1□□□□□ -0.31
DEPDC5-206ENST00000400249 RSF1Q96T23 1441 aaPredicted RBP13.1□□□□□ -0.31
DEPDC5-206ENST00000400249 P3H3Q8IVL6 736 aa13.1□□□□□ -0.31
DEPDC5-206ENST00000400249 BAZ1BQ9UIG0 1483 aaKnown RBP13.07□□□□□ -0.32
DEPDC5-206ENST00000400249 NEUROD1Q13562 356 aa13.04□□□□□ -0.32
DEPDC5-206ENST00000400249 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
DEPDC5-206ENST00000400249 PDS5BQ9NTI5 1447 aa12.99□□□□□ -0.33
DEPDC5-206ENST00000400249 ANP32CO43423 234 aa12.98□□□□□ -0.33
DEPDC5-206ENST00000400249 KCNH8Q96L42 1107 aa12.98□□□□□ -0.33
DEPDC5-206ENST00000400249 CHGAP10645 457 aaKnown RBP12.98□□□□□ -0.33
DEPDC5-206ENST00000400249 DIEXFQ68CQ4 756 aaKnown RBP12.95□□□□□ -0.34
DEPDC5-206ENST00000400249 C14orf37Q86TY3 774 aa12.93□□□□□ -0.34
DEPDC5-206ENST00000400249 PLEKHD1A6NEE1 506 aa12.9□□□□□ -0.34
DEPDC5-206ENST00000400249 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
DEPDC5-206ENST00000400249 UNC13AQ9UPW8 1703 aa12.9□□□□□ -0.35
DEPDC5-206ENST00000400249 WIZO95785 1651 aa12.89□□□□□ -0.35
DEPDC5-206ENST00000400249 ANP32BQ92688 251 aaKnown RBP12.89□□□□□ -0.35
DEPDC5-206ENST00000400249 TSPY4P0CV99 314 aa12.87□□□□□ -0.35
DEPDC5-206ENST00000400249 TSPY10P0CW01 314 aa12.87□□□□□ -0.35
DEPDC5-206ENST00000400249 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
DEPDC5-206ENST00000400249 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
DEPDC5-206ENST00000400249 PPP1R15AO75807 674 aaPredicted RBP12.86□□□□□ -0.35
DEPDC5-206ENST00000400249 HSP90AA1P07900 732 aaKnown RBP12.85□□□□□ -0.35
DEPDC5-206ENST00000400249 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
DEPDC5-206ENST00000400249 CDK11BP21127 795 aaKnown RBP12.81□□□□□ -0.36
DEPDC5-206ENST00000400249 ANP32AP39687 249 aaKnown RBP12.8□□□□□ -0.36
DEPDC5-206ENST00000400249 NPM2Q86SE8 214 aaKnown RBP12.79□□□□□ -0.36
DEPDC5-206ENST00000400249 BICRAQ9NZM4 1560 aa12.77□□□□□ -0.37
DEPDC5-206ENST00000400249 UPF2Q9HAU5 1272 aaKnown RBP12.76□□□□□ -0.37
DEPDC5-206ENST00000400249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
DEPDC5-206ENST00000400249 A0A0G2JS52 829 aa12.76□□□□□ -0.37
DEPDC5-206ENST00000400249 CYB5RLQ6IPT4 315 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms