RNA–Protein interactions for RNA: ENST00000292579.11

ZNF250-201, Transcript of zinc finger protein 250, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF250, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-201ENST00000292579 DCAF8L2P0C7V8 631 aa17.27■□□□□ 0.35
ZNF250-201ENST00000292579 NISCHQ9Y2I1 1504 aa15.99■□□□□ 0.15
ZNF250-201ENST00000292579 SUPT5HO00267 1087 aaKnown RBP15.82■□□□□ 0.12
ZNF250-201ENST00000292579 SHROOM4Q9ULL8 1493 aa15.77■□□□□ 0.11
ZNF250-201ENST00000292579 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
ZNF250-201ENST00000292579 RANGAP1P46060 587 aaPredicted RBP15.03■□□□□ -0
ZNF250-201ENST00000292579 FAM9AQ8IZU1 332 aaPredicted RBP15.01□□□□□ -0.01
ZNF250-201ENST00000292579 APLP2Q06481 763 aa14.96□□□□□ -0.01
ZNF250-201ENST00000292579 TTBK1Q5TCY1 1321 aaPredicted RBP14.95□□□□□ -0.02
ZNF250-201ENST00000292579 ATP1B4Q9UN42 357 aaPredicted RBP14.88□□□□□ -0.03
ZNF250-201ENST00000292579 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
ZNF250-201ENST00000292579 UBTFP17480 764 aaKnown RBP14.53□□□□□ -0.08
ZNF250-201ENST00000292579 MYT1LQ9UL68 1186 aa14.49□□□□□ -0.09
ZNF250-201ENST00000292579 ABCC9O60706 1549 aa14.47□□□□□ -0.09
ZNF250-201ENST00000292579 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
ZNF250-201ENST00000292579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
ZNF250-201ENST00000292579 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
ZNF250-201ENST00000292579 PCGF6Q9BYE7 350 aa14.35□□□□□ -0.11
ZNF250-201ENST00000292579 CHIC1Q5VXU3 224 aa14.32□□□□□ -0.12
ZNF250-201ENST00000292579 PPARGC1BQ86YN6 1023 aaKnown RBP14.26□□□□□ -0.13
ZNF250-201ENST00000292579 ITGAEP38570 1179 aa14.14□□□□□ -0.15
ZNF250-201ENST00000292579 CCER1Q8TC90 406 aaPredicted RBP14.12□□□□□ -0.15
ZNF250-201ENST00000292579 FBLN2P98095 1184 aa14.1□□□□□ -0.15
ZNF250-201ENST00000292579 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.17
ZNF250-201ENST00000292579 POLR3GLQ9BT43 218 aa14□□□□□ -0.17
ZNF250-201ENST00000292579 CNGB1Q14028 1251 aaPredicted RBP13.91□□□□□ -0.18
ZNF250-201ENST00000292579 SLC4A1APQ9BWU0 796 aaKnown RBP13.91□□□□□ -0.18
ZNF250-201ENST00000292579 LOC105371045A0A1W2PR82 267 aa13.82□□□□□ -0.2
ZNF250-201ENST00000292579 ARID3CA6NKF2 412 aa13.81□□□□□ -0.2
ZNF250-201ENST00000292579 PLPPR3Q6T4P5 718 aa13.77□□□□□ -0.21
ZNF250-201ENST00000292579 YTHDC1Q96MU7 727 aaKnown RBP13.76□□□□□ -0.21
ZNF250-201ENST00000292579 FAM50AQ14320 339 aaKnown RBP13.75□□□□□ -0.21
ZNF250-201ENST00000292579 BCANQ96GW7 911 aa13.69□□□□□ -0.22
ZNF250-201ENST00000292579 ZEB1P37275 1124 aaPredicted RBP13.69□□□□□ -0.22
ZNF250-201ENST00000292579 P3H3Q8IVL6 736 aa13.68□□□□□ -0.22
ZNF250-201ENST00000292579 TRIM52Q96A61 297 aa13.68□□□□□ -0.22
ZNF250-201ENST00000292579 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
ZNF250-201ENST00000292579 ERICH6Q7L0X2 663 aa13.6□□□□□ -0.23
ZNF250-201ENST00000292579 CENPBP07199 599 aaPredicted RBP13.58□□□□□ -0.24
ZNF250-201ENST00000292579 NEFLP07196 543 aa13.56□□□□□ -0.24
ZNF250-201ENST00000292579 ZNF777Q9ULD5 760 aaPredicted RBP13.56□□□□□ -0.24
ZNF250-201ENST00000292579 ZNF326Q5BKZ1 582 aaKnown RBP13.55□□□□□ -0.24
ZNF250-201ENST00000292579 TRIM26Q12899 539 aaPredicted RBP13.54□□□□□ -0.24
ZNF250-201ENST00000292579 ESF1Q9H501 851 aaKnown RBP13.52□□□□□ -0.25
ZNF250-201ENST00000292579 NEUROD1Q13562 356 aa13.51□□□□□ -0.25
ZNF250-201ENST00000292579 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
ZNF250-201ENST00000292579 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
ZNF250-201ENST00000292579 STAG3Q9UJ98 1225 aa13.39□□□□□ -0.27
ZNF250-201ENST00000292579 CHGAP10645 457 aaKnown RBP13.38□□□□□ -0.27
ZNF250-201ENST00000292579 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
ZNF250-201ENST00000292579 CDK11AQ9UQ88 783 aaPredicted RBP13.3□□□□□ -0.28
ZNF250-201ENST00000292579 SENP3Q9H4L4 574 aaPredicted RBP13.29□□□□□ -0.28
ZNF250-201ENST00000292579 BCL11AQ9H165 835 aa13.28□□□□□ -0.28
ZNF250-201ENST00000292579 CSRNP3Q8WYN3 585 aa13.26□□□□□ -0.29
ZNF250-201ENST00000292579 RB1CC1Q8TDY2 1594 aa13.25□□□□□ -0.29
ZNF250-201ENST00000292579 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.24□□□□□ -0.29
ZNF250-201ENST00000292579 DAXXQ9UER7 740 aaPredicted RBP13.24□□□□□ -0.29
ZNF250-201ENST00000292579 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
ZNF250-201ENST00000292579 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
ZNF250-201ENST00000292579 ERCC6Q03468 1493 aa13.22□□□□□ -0.29
ZNF250-201ENST00000292579 PLEKHG5O94827 1062 aa13.21□□□□□ -0.3
ZNF250-201ENST00000292579 TRHP20396 242 aaPredicted RBP13.19□□□□□ -0.3
ZNF250-201ENST00000292579 CLSPNQ9HAW4 1339 aa13.19□□□□□ -0.3
ZNF250-201ENST00000292579 HRCP23327 699 aa13.19□□□□□ -0.3
ZNF250-201ENST00000292579 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
ZNF250-201ENST00000292579 CHIC2Q9UKJ5 165 aa13.15□□□□□ -0.3
ZNF250-201ENST00000292579 CCDC180Q9P1Z9 1646 aa13.15□□□□□ -0.31
ZNF250-201ENST00000292579 A0A0G2JS52 829 aa13.13□□□□□ -0.31
ZNF250-201ENST00000292579 ZCCHC6Q5VYS8 1495 aaKnown RBP13.12□□□□□ -0.31
ZNF250-201ENST00000292579 NEFMP07197 916 aa13.12□□□□□ -0.31
ZNF250-201ENST00000292579 ZBTB7CA1YPR0 619 aa13.08□□□□□ -0.32
ZNF250-201ENST00000292579 C14orf37Q86TY3 774 aa13.06□□□□□ -0.32
ZNF250-201ENST00000292579 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
ZNF250-201ENST00000292579 CANXP27824 592 aaKnown RBP13.04□□□□□ -0.32
ZNF250-201ENST00000292579 TSPY4P0CV99 314 aa13.01□□□□□ -0.33
ZNF250-201ENST00000292579 TSPY10P0CW01 314 aa13.01□□□□□ -0.33
ZNF250-201ENST00000292579 ANP32CO43423 234 aa13.01□□□□□ -0.33
ZNF250-201ENST00000292579 BAZ1BQ9UIG0 1483 aaKnown RBP13□□□□□ -0.33
ZNF250-201ENST00000292579 PPP1R15AO75807 674 aaPredicted RBP13□□□□□ -0.33
ZNF250-201ENST00000292579 DIEXFQ68CQ4 756 aaKnown RBP13□□□□□ -0.33
ZNF250-201ENST00000292579 KDM2AQ9Y2K7 1162 aa12.99□□□□□ -0.33
ZNF250-201ENST00000292579 NACADO15069 1562 aa12.95□□□□□ -0.34
ZNF250-201ENST00000292579 PLEKHD1A6NEE1 506 aa12.95□□□□□ -0.34
ZNF250-201ENST00000292579 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
ZNF250-201ENST00000292579 ZNF316A6NFI3 1004 aaPredicted RBP12.94□□□□□ -0.34
ZNF250-201ENST00000292579 HAP1P54257 671 aaPredicted RBP12.93□□□□□ -0.34
ZNF250-201ENST00000292579 MLECQ14165 292 aa12.91□□□□□ -0.34
ZNF250-201ENST00000292579 RRP7BPQ9NSQ0 103 aa12.89□□□□□ -0.35
ZNF250-201ENST00000292579 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
ZNF250-201ENST00000292579 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
ZNF250-201ENST00000292579 RGL3Q3MIN7 710 aa12.83□□□□□ -0.36
ZNF250-201ENST00000292579 LMOD2Q6P5Q4 547 aa12.83□□□□□ -0.36
ZNF250-201ENST00000292579 MYT1Q01538 1121 aa12.82□□□□□ -0.36
ZNF250-201ENST00000292579 EIF4G1Q04637 1599 aaKnown RBP12.82□□□□□ -0.36
ZNF250-201ENST00000292579 CFDP1Q9UEE9 299 aaPredicted RBP12.79□□□□□ -0.36
ZNF250-201ENST00000292579 TMC1Q8TDI8 760 aa12.78□□□□□ -0.36
ZNF250-201ENST00000292579 CECR2Q9BXF3 1484 aa12.77□□□□□ -0.37
ZNF250-201ENST00000292579 NPM2Q86SE8 214 aaKnown RBP12.76□□□□□ -0.37
ZNF250-201ENST00000292579 ARXQ96QS3 562 aa12.76□□□□□ -0.37
ZNF250-201ENST00000292579 RSF1Q96T23 1441 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms