RNA–Protein interactions for RNA: ENST00000399756.8

TRPV1-202, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-202ENST00000399756 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
TRPV1-202ENST00000399756 DCAF8L2P0C7V8 631 aa17.67■□□□□ 0.42
TRPV1-202ENST00000399756 SUPT5HO00267 1087 aaKnown RBP17.36■□□□□ 0.37
TRPV1-202ENST00000399756 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
TRPV1-202ENST00000399756 EHMT2Q96KQ7 1210 aa16.57■□□□□ 0.24
TRPV1-202ENST00000399756 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
TRPV1-202ENST00000399756 FAM9AQ8IZU1 332 aaPredicted RBP16.28■□□□□ 0.2
TRPV1-202ENST00000399756 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
TRPV1-202ENST00000399756 TTBK1Q5TCY1 1321 aaPredicted RBP15.99■□□□□ 0.15
TRPV1-202ENST00000399756 LOC105371045A0A1W2PR82 267 aa15.98■□□□□ 0.15
TRPV1-202ENST00000399756 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
TRPV1-202ENST00000399756 PPARGC1BQ86YN6 1023 aaKnown RBP15.83■□□□□ 0.12
TRPV1-202ENST00000399756 HRCP23327 699 aa15.8■□□□□ 0.12
TRPV1-202ENST00000399756 RANGAP1P46060 587 aaPredicted RBP15.66■□□□□ 0.1
TRPV1-202ENST00000399756 TRIM26Q12899 539 aaPredicted RBP15.61■□□□□ 0.09
TRPV1-202ENST00000399756 CCER1Q8TC90 406 aaPredicted RBP15.57■□□□□ 0.08
TRPV1-202ENST00000399756 UBTFP17480 764 aaKnown RBP15.5■□□□□ 0.07
TRPV1-202ENST00000399756 APLP2Q06481 763 aa15.48■□□□□ 0.07
TRPV1-202ENST00000399756 ZEB1P37275 1124 aaPredicted RBP15.48■□□□□ 0.07
TRPV1-202ENST00000399756 ZCCHC6Q5VYS8 1495 aaKnown RBP15.44■□□□□ 0.06
TRPV1-202ENST00000399756 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
TRPV1-202ENST00000399756 ABCC9O60706 1549 aa15.35■□□□□ 0.05
TRPV1-202ENST00000399756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
TRPV1-202ENST00000399756 YTHDC1Q96MU7 727 aaKnown RBP15.26■□□□□ 0.03
TRPV1-202ENST00000399756 CENPBP07199 599 aaPredicted RBP15.17■□□□□ 0.02
TRPV1-202ENST00000399756 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
TRPV1-202ENST00000399756 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.023e-7■■■■□ 25.8
TRPV1-202ENST00000399756 ATP1B4Q9UN42 357 aaPredicted RBP15.15■□□□□ 0.02
TRPV1-202ENST00000399756 SCRIBQ14160 1630 aa15.1■□□□□ 0.01
TRPV1-202ENST00000399756 CCDC180Q9P1Z9 1646 aa15.08■□□□□ 0
TRPV1-202ENST00000399756 ITGAEP38570 1179 aa15.05■□□□□ -0
TRPV1-202ENST00000399756 DCAF1Q9Y4B6 1507 aa14.98□□□□□ -0.01
TRPV1-202ENST00000399756 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
TRPV1-202ENST00000399756 RSF1Q96T23 1441 aaPredicted RBP14.9□□□□□ -0.02
TRPV1-202ENST00000399756 PELP1Q8IZL8 1130 aaKnown RBP14.87□□□□□ -0.03
TRPV1-202ENST00000399756 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
TRPV1-202ENST00000399756 GTF3C3Q9Y5Q9 886 aa14.77□□□□□ -0.04
TRPV1-202ENST00000399756 CECR2Q9BXF3 1484 aa14.7□□□□□ -0.06
TRPV1-202ENST00000399756 ZNF316A6NFI3 1004 aaPredicted RBP14.66□□□□□ -0.06
TRPV1-202ENST00000399756 ACIN1Q9UKV3 1341 aaKnown RBP14.64□□□□□ -0.07
TRPV1-202ENST00000399756 FAM50AQ14320 339 aaKnown RBP14.62□□□□□ -0.07
TRPV1-202ENST00000399756 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
TRPV1-202ENST00000399756 NEUROD1Q13562 356 aa14.61□□□□□ -0.07
TRPV1-202ENST00000399756 RB1CC1Q8TDY2 1594 aa14.6□□□□□ -0.07
TRPV1-202ENST00000399756 P3H3Q8IVL6 736 aa14.59□□□□□ -0.07
TRPV1-202ENST00000399756 CNGB1Q14028 1251 aaPredicted RBP14.58□□□□□ -0.07
TRPV1-202ENST00000399756 NEFLP07196 543 aa14.55□□□□□ -0.08
TRPV1-202ENST00000399756 MROH2BQ7Z745 1585 aa14.49□□□□□ -0.09
TRPV1-202ENST00000399756 CEP162Q5TB80 1403 aa14.49□□□□□ -0.09
TRPV1-202ENST00000399756 POLR3GLQ9BT43 218 aa14.48□□□□□ -0.09
TRPV1-202ENST00000399756 MYT1Q01538 1121 aa14.48□□□□□ -0.09
TRPV1-202ENST00000399756 BCANQ96GW7 911 aa14.48□□□□□ -0.09
TRPV1-202ENST00000399756 MIER1Q8N108 512 aa14.44□□□□□ -0.1
TRPV1-202ENST00000399756 SOGA1O94964 1423 aa14.43□□□□□ -0.1
TRPV1-202ENST00000399756 ARID3CA6NKF2 412 aa14.41□□□□□ -0.1
TRPV1-202ENST00000399756 NACADO15069 1562 aa14.4□□□□□ -0.1
TRPV1-202ENST00000399756 CLIP1P30622 1438 aa14.39□□□□□ -0.11
TRPV1-202ENST00000399756 ERICH6Q7L0X2 663 aa14.38□□□□□ -0.11
TRPV1-202ENST00000399756 ABCC8Q09428 1581 aa14.38□□□□□ -0.11
TRPV1-202ENST00000399756 TRIM52Q96A61 297 aa14.35□□□□□ -0.11
TRPV1-202ENST00000399756 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
TRPV1-202ENST00000399756 WRNQ14191 1432 aaPredicted RBP eCLIP14.34□□□□□ -0.11
TRPV1-202ENST00000399756 WIZO95785 1651 aa14.33□□□□□ -0.12
TRPV1-202ENST00000399756 TNIKQ9UKE5 1360 aa14.32□□□□□ -0.12
TRPV1-202ENST00000399756 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
TRPV1-202ENST00000399756 HIRIP3Q9BW71 556 aaPredicted RBP14.3□□□□□ -0.12
TRPV1-202ENST00000399756 GOLGA3Q08378 1498 aa14.29□□□□□ -0.12
TRPV1-202ENST00000399756 DDX10Q13206 875 aaKnown RBP14.28□□□□□ -0.12
TRPV1-202ENST00000399756 EEA1Q15075 1411 aa14.22□□□□□ -0.13
TRPV1-202ENST00000399756 ANP32CO43423 234 aa14.22□□□□□ -0.13
TRPV1-202ENST00000399756 ZNF326Q5BKZ1 582 aaKnown RBP14.22□□□□□ -0.13
TRPV1-202ENST00000399756 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
TRPV1-202ENST00000399756 BAZ1BQ9UIG0 1483 aaKnown RBP14.17□□□□□ -0.14
TRPV1-202ENST00000399756 FBLN2P98095 1184 aa14.16□□□□□ -0.14
TRPV1-202ENST00000399756 CEP164Q9UPV0 1460 aa14.16□□□□□ -0.14
TRPV1-202ENST00000399756 CHIC2Q9UKJ5 165 aa14.16□□□□□ -0.14
TRPV1-202ENST00000399756 FKBP8Q14318 412 aa14.13□□□□□ -0.15
TRPV1-202ENST00000399756 KANK4Q5T7N3 995 aaPredicted RBP14.13□□□□□ -0.15
TRPV1-202ENST00000399756 SIN3AQ96ST3 1273 aa14.1□□□□□ -0.15
TRPV1-202ENST00000399756 MYT1LQ9UL68 1186 aa14.09□□□□□ -0.15
TRPV1-202ENST00000399756 ZNF777Q9ULD5 760 aaPredicted RBP14.07□□□□□ -0.16
TRPV1-202ENST00000399756 TONSLQ96HA7 1378 aa14.07□□□□□ -0.16
TRPV1-202ENST00000399756 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
TRPV1-202ENST00000399756 HNRNPUQ00839 825 aaKnown RBP eCLIP14.03□□□□□ -0.16
TRPV1-202ENST00000399756 VPS8Q8N3P4 1428 aa14.02□□□□□ -0.16
TRPV1-202ENST00000399756 KIF27Q86VH2 1401 aa14.02□□□□□ -0.17
TRPV1-202ENST00000399756 RRP7BPQ9NSQ0 103 aa14.02□□□□□ -0.17
TRPV1-202ENST00000399756 IRX6P78412 446 aaPredicted RBP14□□□□□ -0.17
TRPV1-202ENST00000399756 MTUS2Q5JR59 1369 aa13.99□□□□□ -0.17
TRPV1-202ENST00000399756 FAM9BQ8IZU0 186 aa13.98□□□□□ -0.17
TRPV1-202ENST00000399756 RAPGEF2Q9Y4G8 1499 aa13.98□□□□□ -0.17
TRPV1-202ENST00000399756 SENP3-EIF4A1A0A087X0R7 540 aa13.98□□□□□ -0.17
TRPV1-202ENST00000399756 SMARCA4P51532 1647 aa13.95□□□□□ -0.18
TRPV1-202ENST00000399756 CCNB3Q8WWL7 1395 aa13.95□□□□□ -0.18
TRPV1-202ENST00000399756 CDK11AQ9UQ88 783 aaPredicted RBP13.93□□□□□ -0.18
TRPV1-202ENST00000399756 CUX2O14529 1486 aa13.91□□□□□ -0.18
TRPV1-202ENST00000399756 SMARCA2P51531 1590 aa13.89□□□□□ -0.19
TRPV1-202ENST00000399756 CARMIL1Q5VZK9 1371 aa13.88□□□□□ -0.19
TRPV1-202ENST00000399756 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
TRPV1-202ENST00000399756 SALL2Q9Y467 1007 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms