Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 IFIT3-201ENST00000371811 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 MX2-201ENST00000330714 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 AL645922.1-201ENST00000456570 3874 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 MDH1B-201ENST00000374412 2553 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 BAGE2-203ENST00000496773 2598 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 SEZ6L2-204ENST00000537485 3423 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 AL512625.3-201ENST00000586625 1440 ntTSL 3 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 NDUFB3-201ENST00000237889 755 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 EMP3-201ENST00000270221 876 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 NUP43-203ENST00000367404 1089 ntTSL 2 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 MCTS1-201ENST00000371315 1130 ntTSL 2 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 BPIFA1-203ENST00000375422 1063 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 NIFKP1-201ENST00000398317 889 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 AP001619.1-201ENST00000432411 447 ntTSL 3 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 LINC00475-206ENST00000434944 796 ntTSL 3 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 AC062020.1-201ENST00000435441 801 ntTSL 3 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 AL451062.1-201ENST00000437753 469 ntTSL 2 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 AC026477.1-201ENST00000439391 616 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 AL672032.1-201ENST00000440614 938 ntTSL 3 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 AP001885.1-202ENST00000444002 1255 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 C11orf98P1-201ENST00000446114 318 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 IGKV1-6-201ENST00000464162 380 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 IGKV1-37-201ENST00000465170 398 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 MED27-204ENST00000474263 762 ntTSL 2 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 LINC00635-207ENST00000488852 1197 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 IGKV1-9-201ENST00000493819 409 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 IGKV1-5-201ENST00000496168 532 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 SERBP1P6-201ENST00000507707 932 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 IGKV1D-37-201ENST00000509129 353 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 LINC02216-201ENST00000513366 581 ntTSL 4 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 LINC01411-206ENST00000515513 770 ntTSL 5 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 LINC02467-201ENST00000542804 637 ntTSL 3 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 FAM181A-AS1-203ENST00000555732 258 ntTSL 3 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 IGKV2D-28-202ENST00000558026 306 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 AC104758.5-201ENST00000569892 571 ntTSL 3 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 SNHG16-204ENST00000586942 568 ntTSL 4 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 RPL7AP66-201ENST00000588490 801 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 SNRPD2-208ENST00000590212 454 ntTSL 3 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 TEX26-AS1-216ENST00000592950 747 ntTSL 5 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 LINC01943-202ENST00000628090 926 ntTSL 5 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 AC093390.2-202ENST00000638236 976 ntTSL 5 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 OLMALINC-205ENST00000641708 1184 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 ACSS1-205ENST00000537502 3509 ntTSL 2 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 ZSCAN31-209ENST00000439158 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 C11orf49-202ENST00000378615 1651 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 OARD1-210ENST00000479950 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 SPG21-209ENST00000559199 2059 ntTSL 2 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 SLA-203ENST00000427060 1914 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 PDK4-201ENST00000005178 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 HIPK1-203ENST00000369553 2883 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 CAPN2-202ENST00000433674 3264 ntTSL 2 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 ASH2LP3-201ENST00000436538 1642 ntBASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 ADAM30-201ENST00000369400 2963 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 L3MBTL4-AS1-201ENST00000578427 2044 ntTSL 5 BASIC9.09□□□□□ -0.95
NPIPA3F8WFD2 ARHGEF39-201ENST00000378387 3769 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
NPIPA3F8WFD2 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
NPIPA3F8WFD2 HSD17B2-201ENST00000199936 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 VSNL1-201ENST00000295156 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 APOL1-202ENST00000397278 2918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 ACVR2B-AS1-201ENST00000441531 2517 ntTSL 2 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 ACMSD-201ENST00000356140 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 RFX2-202ENST00000359161 3595 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 GABRA2-201ENST00000356504 2770 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 FAAH2-201ENST00000374900 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 ADHFE1-204ENST00000415254 1956 ntTSL 5 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 ELAVL4-204ENST00000371823 1591 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 EPHB2-203ENST00000374632 3677 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 GABRP-206ENST00000519385 1567 ntTSL 2 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 ZNF814-213ENST00000597832 2090 ntTSL 2 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 ARAP1-207ENST00000429686 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 GTF2H1-214ENST00000534641 2587 ntTSL 2 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 EIF3K-201ENST00000248342 864 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 RN7SKP243-201ENST00000363105 309 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 RPL35P2-201ENST00000402419 363 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 AC064847.1-201ENST00000403125 506 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 RN7SKP54-201ENST00000410704 269 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 PLA2G6-204ENST00000417303 501 ntTSL 4 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 AC022431.2-201ENST00000431789 536 ntTSL 4 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 LINC00545-201ENST00000440633 411 ntTSL 2 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 COTL1P2-201ENST00000455360 352 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 AC007207.1-201ENST00000489396 555 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 C5orf64-AS1-201ENST00000506550 1265 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 AC094104.2-201ENST00000509718 622 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 MAFA-AS1-201ENST00000519762 417 ntTSL 2 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 AC140847.3-201ENST00000542491 708 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 TMEM97-203ENST00000582113 493 ntTSL 2 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 AP005482.3-201ENST00000585877 720 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 LINC01841-202ENST00000588438 523 ntTSL 3 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 TP53TG1-206ENST00000610086 849 ntTSL 3 BASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 Metazoa_SRP.205-201ENST00000620071 267 ntBASIC9.08□□□□□ -0.96
NPIPA3F8WFD2 AC098476.1-201ENST00000623173 1025 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 229.4 ms