RNA–Protein interactions for RNA: ENST00000005178.5

PDK4-201, Transcript of pyruvate dehydrogenase kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDK4, Length 3,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK4-201ENST00000005178 NISCHQ9Y2I1 1504 aa20.26■□□□□ 0.83
PDK4-201ENST00000005178 SHROOM4Q9ULL8 1493 aa18.19■□□□□ 0.5
PDK4-201ENST00000005178 SUPT5HO00267 1087 aaKnown RBP18.02■□□□□ 0.48
PDK4-201ENST00000005178 DCAF8L2P0C7V8 631 aa17.63■□□□□ 0.41
PDK4-201ENST00000005178 CCDC180Q9P1Z9 1646 aa17.59■□□□□ 0.41
PDK4-201ENST00000005178 PCGF6Q9BYE7 350 aa17.39■□□□□ 0.37
PDK4-201ENST00000005178 CHIC1Q5VXU3 224 aa17.35■□□□□ 0.37
PDK4-201ENST00000005178 HRCP23327 699 aa17.32■□□□□ 0.36
PDK4-201ENST00000005178 MYO15BQ96JP2 1530 aa17.27■□□□□ 0.36
PDK4-201ENST00000005178 PPARGC1BQ86YN6 1023 aaKnown RBP17.23■□□□□ 0.35
PDK4-201ENST00000005178 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
PDK4-201ENST00000005178 LOC105371045A0A1W2PR82 267 aa17.11■□□□□ 0.33
PDK4-201ENST00000005178 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
PDK4-201ENST00000005178 DCAF1Q9Y4B6 1507 aa16.77■□□□□ 0.28
PDK4-201ENST00000005178 FAM9AQ8IZU1 332 aaPredicted RBP16.76■□□□□ 0.27
PDK4-201ENST00000005178 TRIM26Q12899 539 aaPredicted RBP16.71■□□□□ 0.27
PDK4-201ENST00000005178 TRIM41Q8WV44 630 aa16.58■□□□□ 0.25
PDK4-201ENST00000005178 ZEB1P37275 1124 aaPredicted RBP16.37■□□□□ 0.21
PDK4-201ENST00000005178 TTBK1Q5TCY1 1321 aaPredicted RBP16.33■□□□□ 0.2
PDK4-201ENST00000005178 RSF1Q96T23 1441 aaPredicted RBP16.29■□□□□ 0.2
PDK4-201ENST00000005178 SCRIBQ14160 1630 aa16.26■□□□□ 0.19
PDK4-201ENST00000005178 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
PDK4-201ENST00000005178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.25■□□□□ 0.19
PDK4-201ENST00000005178 CCER1Q8TC90 406 aaPredicted RBP16.19■□□□□ 0.18
PDK4-201ENST00000005178 ABCC9O60706 1549 aa16.17■□□□□ 0.18
PDK4-201ENST00000005178 RB1CC1Q8TDY2 1594 aa16.15■□□□□ 0.18
PDK4-201ENST00000005178 NACADO15069 1562 aa16.14■□□□□ 0.18
PDK4-201ENST00000005178 CECR2Q9BXF3 1484 aa16.02■□□□□ 0.16
PDK4-201ENST00000005178 PELP1Q8IZL8 1130 aaKnown RBP16.02■□□□□ 0.16
PDK4-201ENST00000005178 UNC13AQ9UPW8 1703 aa16■□□□□ 0.15
PDK4-201ENST00000005178 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
PDK4-201ENST00000005178 DIEXFQ68CQ4 756 aaKnown RBP15.95■□□□□ 0.14
PDK4-201ENST00000005178 ACIN1Q9UKV3 1341 aaKnown RBP15.93■□□□□ 0.14
PDK4-201ENST00000005178 GTF3C3Q9Y5Q9 886 aa15.91■□□□□ 0.14
PDK4-201ENST00000005178 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
PDK4-201ENST00000005178 YTHDC1Q96MU7 727 aaKnown RBP15.88■□□□□ 0.13
PDK4-201ENST00000005178 UBTFP17480 764 aaKnown RBP15.86■□□□□ 0.13
PDK4-201ENST00000005178 CENPBP07199 599 aaPredicted RBP15.83■□□□□ 0.12
PDK4-201ENST00000005178 WIZO95785 1651 aa15.81■□□□□ 0.12
PDK4-201ENST00000005178 RANGAP1P46060 587 aaPredicted RBP15.79■□□□□ 0.12
PDK4-201ENST00000005178 HNRNPUL2Q1KMD3 747 aaKnown RBP15.75■□□□□ 0.11
PDK4-201ENST00000005178 ABCC8Q09428 1581 aa15.71■□□□□ 0.1
PDK4-201ENST00000005178 BICRAQ9NZM4 1560 aa15.7■□□□□ 0.1
PDK4-201ENST00000005178 CCDC88BA6NC98 1476 aa15.69■□□□□ 0.1
PDK4-201ENST00000005178 SOGA1O94964 1423 aa15.67■□□□□ 0.1
PDK4-201ENST00000005178 CEP162Q5TB80 1403 aa15.67■□□□□ 0.1
PDK4-201ENST00000005178 ZNF316A6NFI3 1004 aaPredicted RBP15.65■□□□□ 0.1
PDK4-201ENST00000005178 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
PDK4-201ENST00000005178 MIER1Q8N108 512 aa15.59■□□□□ 0.09
PDK4-201ENST00000005178 RUSC2Q8N2Y8 1516 aa15.59■□□□□ 0.09
PDK4-201ENST00000005178 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
PDK4-201ENST00000005178 APLP2Q06481 763 aa15.53■□□□□ 0.08
PDK4-201ENST00000005178 BAZ1AQ9NRL2 1556 aaPredicted RBP15.52■□□□□ 0.08
PDK4-201ENST00000005178 TNIKQ9UKE5 1360 aa15.52■□□□□ 0.07
PDK4-201ENST00000005178 WRNQ14191 1432 aaPredicted RBP eCLIP15.49■□□□□ 0.07
PDK4-201ENST00000005178 EIF4G1Q04637 1599 aaKnown RBP15.46■□□□□ 0.07
PDK4-201ENST00000005178 SMARCA4P51532 1647 aa15.45■□□□□ 0.06
PDK4-201ENST00000005178 PEG3Q9GZU2 1588 aa15.42■□□□□ 0.06
PDK4-201ENST00000005178 TOP2AP11388 1531 aaKnown RBP15.39■□□□□ 0.06
PDK4-201ENST00000005178 SMARCA2P51531 1590 aa15.38■□□□□ 0.05
PDK4-201ENST00000005178 GOLGA3Q08378 1498 aa15.37■□□□□ 0.05
PDK4-201ENST00000005178 CLIP1P30622 1438 aa15.34■□□□□ 0.05
PDK4-201ENST00000005178 ITGAEP38570 1179 aa15.34■□□□□ 0.05
PDK4-201ENST00000005178 EEA1Q15075 1411 aa15.31■□□□□ 0.04
PDK4-201ENST00000005178 CEP164Q9UPV0 1460 aa15.23■□□□□ 0.03
PDK4-201ENST00000005178 MYT1Q01538 1121 aa15.21■□□□□ 0.02
PDK4-201ENST00000005178 RAPGEF2Q9Y4G8 1499 aa15.2■□□□□ 0.02
PDK4-201ENST00000005178 VPS8Q8N3P4 1428 aa15.2■□□□□ 0.02
PDK4-201ENST00000005178 KANK4Q5T7N3 995 aaPredicted RBP15.2■□□□□ 0.02
PDK4-201ENST00000005178 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
PDK4-201ENST00000005178 BCANQ96GW7 911 aa15.14■□□□□ 0.01
PDK4-201ENST00000005178 SUPT16HQ9Y5B9 1047 aaKnown RBP15.13■□□□□ 0.01
PDK4-201ENST00000005178 KCNH8Q96L42 1107 aa15.12■□□□□ 0.01
PDK4-201ENST00000005178 DHX57Q6P158 1386 aaKnown RBP15.09■□□□□ 0.01
PDK4-201ENST00000005178 ATP1B4Q9UN42 357 aaPredicted RBP15.08■□□□□ 0
PDK4-201ENST00000005178 KIF21BO75037 1637 aa15.05■□□□□ 0
PDK4-201ENST00000005178 HIRIP3Q9BW71 556 aaPredicted RBP15.04■□□□□ -0
PDK4-201ENST00000005178 ATAD2BQ9ULI0 1458 aa15.03■□□□□ -0
PDK4-201ENST00000005178 BAZ1BQ9UIG0 1483 aaKnown RBP15.02□□□□□ -0.01
PDK4-201ENST00000005178 DDX10Q13206 875 aaKnown RBP15.01□□□□□ -0.01
PDK4-201ENST00000005178 FAM50AQ14320 339 aaKnown RBP14.98□□□□□ -0.01
PDK4-201ENST00000005178 HMGXB3Q12766 1538 aa14.98□□□□□ -0.01
PDK4-201ENST00000005178 P3H3Q8IVL6 736 aa14.97□□□□□ -0.01
PDK4-201ENST00000005178 SIN3AQ96ST3 1273 aa14.96□□□□□ -0.01
PDK4-201ENST00000005178 TSHZ2Q9NRE2 1034 aa14.96□□□□□ -0.01
PDK4-201ENST00000005178 CLSPNQ9HAW4 1339 aa14.96□□□□□ -0.02
PDK4-201ENST00000005178 FKBP8Q14318 412 aa14.94□□□□□ -0.02
PDK4-201ENST00000005178 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
PDK4-201ENST00000005178 CCNB3Q8WWL7 1395 aa14.92□□□□□ -0.02
PDK4-201ENST00000005178 TRIM52Q96A61 297 aa14.91□□□□□ -0.02
PDK4-201ENST00000005178 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
PDK4-201ENST00000005178 RAB3GAP2Q9H2M9 1393 aa14.88□□□□□ -0.03
PDK4-201ENST00000005178 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
PDK4-201ENST00000005178 PRXQ9BXM0 1461 aa14.83□□□□□ -0.04
PDK4-201ENST00000005178 KIF27Q86VH2 1401 aa14.83□□□□□ -0.04
PDK4-201ENST00000005178 NEFLP07196 543 aa14.82□□□□□ -0.04
PDK4-201ENST00000005178 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
PDK4-201ENST00000005178 RRBP1Q9P2E9 1410 aaKnown RBP14.8□□□□□ -0.04
PDK4-201ENST00000005178 ANP32EQ9BTT0 268 aa14.78□□□□□ -0.04
PDK4-201ENST00000005178 ARHGAP35Q9NRY4 1499 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms