RNA–Protein interactions for RNA: ENST00000508827.1

AL355916.1-202, humanhuman

TSL 1 (best) BASIC

Gene AL355916.1, Length 5,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355916.1-202ENST00000508827 MYT1Q01538 1121 aa16.75■□□□□ 0.27
AL355916.1-202ENST00000508827 PELP1Q8IZL8 1130 aaKnown RBP16.52■□□□□ 0.24
AL355916.1-202ENST00000508827 TTBK1Q5TCY1 1321 aaPredicted RBP15.68■□□□□ 0.1
AL355916.1-202ENST00000508827 ERICH6Q7L0X2 663 aa15.5■□□□□ 0.07
AL355916.1-202ENST00000508827 SLC24A1O60721 1099 aa14.94□□□□□ -0.02
AL355916.1-202ENST00000508827 DCAF8L2P0C7V8 631 aa14.8□□□□□ -0.04
AL355916.1-202ENST00000508827 CENPBP07199 599 aaPredicted RBP14.63□□□□□ -0.07
AL355916.1-202ENST00000508827 RANGAP1P46060 587 aaPredicted RBP14.54□□□□□ -0.08
AL355916.1-202ENST00000508827 NISCHQ9Y2I1 1504 aa14.34□□□□□ -0.11
AL355916.1-202ENST00000508827 CCER1Q8TC90 406 aaPredicted RBP14.33□□□□□ -0.12
AL355916.1-202ENST00000508827 YTHDC1Q96MU7 727 aaKnown RBP14.21□□□□□ -0.13
AL355916.1-202ENST00000508827 EIF5BO60841 1220 aaKnown RBP14.18□□□□□ -0.14
AL355916.1-202ENST00000508827 GLIPR1L2Q4G1C9 344 aa14.06□□□□□ -0.16
AL355916.1-202ENST00000508827 BCL11AQ9H165 835 aa14.06□□□□□ -0.16
AL355916.1-202ENST00000508827 PRKCSHP14314 528 aaPredicted RBP14.04□□□□□ -0.16
AL355916.1-202ENST00000508827 DAXXQ9UER7 740 aaPredicted RBP13.99□□□□□ -0.17
AL355916.1-202ENST00000508827 ZEB1P37275 1124 aaPredicted RBP13.93□□□□□ -0.18
AL355916.1-202ENST00000508827 HRCP23327 699 aa13.91□□□□□ -0.18
AL355916.1-202ENST00000508827 NEFLP07196 543 aa13.71□□□□□ -0.21
AL355916.1-202ENST00000508827 MYT1LQ9UL68 1186 aa13.7□□□□□ -0.22
AL355916.1-202ENST00000508827 PCGF6Q9BYE7 350 aa13.68□□□□□ -0.22
AL355916.1-202ENST00000508827 RTL5Q5HYW3 569 aaPredicted RBP13.66□□□□□ -0.22
AL355916.1-202ENST00000508827 EHMT2Q96KQ7 1210 aa13.66□□□□□ -0.22
AL355916.1-202ENST00000508827 APLP2Q06481 763 aa13.6□□□□□ -0.23
AL355916.1-202ENST00000508827 GTF3C3Q9Y5Q9 886 aa13.57□□□□□ -0.24
AL355916.1-202ENST00000508827 PODXL2Q9NZ53 605 aa13.53□□□□□ -0.24
AL355916.1-202ENST00000508827 ANP32EQ9BTT0 268 aa13.52□□□□□ -0.24
AL355916.1-202ENST00000508827 CLSPNQ9HAW4 1339 aa13.51□□□□□ -0.25
AL355916.1-202ENST00000508827 FAM9AQ8IZU1 332 aaPredicted RBP13.45□□□□□ -0.26
AL355916.1-202ENST00000508827 ACIN1Q9UKV3 1341 aaKnown RBP13.43□□□□□ -0.26
AL355916.1-202ENST00000508827 SCAF1Q9H7N4 1312 aaKnown RBP13.39□□□□□ -0.27
AL355916.1-202ENST00000508827 POLR3GLQ9BT43 218 aa13.38□□□□□ -0.27
AL355916.1-202ENST00000508827 PPARGC1BQ86YN6 1023 aaKnown RBP13.29□□□□□ -0.28
AL355916.1-202ENST00000508827 PKNOX2Q96KN3 472 aa13.26□□□□□ -0.29
AL355916.1-202ENST00000508827 SUPT5HO00267 1087 aaKnown RBP13.25□□□□□ -0.29
AL355916.1-202ENST00000508827 ZNF326Q5BKZ1 582 aaKnown RBP13.23□□□□□ -0.29
AL355916.1-202ENST00000508827 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
AL355916.1-202ENST00000508827 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
AL355916.1-202ENST00000508827 NCLP19338 710 aaKnown RBP13.11□□□□□ -0.31
AL355916.1-202ENST00000508827 ERICH6BQ5W0A0 696 aa13.09□□□□□ -0.31
AL355916.1-202ENST00000508827 HOMEZQ8IX15 550 aa13.06□□□□□ -0.32
AL355916.1-202ENST00000508827 TNNT2P45379 298 aaPredicted RBP13.04□□□□□ -0.32
AL355916.1-202ENST00000508827 PDE4CQ08493 712 aa13.03□□□□□ -0.32
AL355916.1-202ENST00000508827 CDK11BP21127 795 aaKnown RBP13□□□□□ -0.33
AL355916.1-202ENST00000508827 A0A0U1RQG5 324 aaPredicted RBP12.99□□□□□ -0.33
AL355916.1-202ENST00000508827 NCBP3Q53F19 620 aaKnown RBP12.99□□□□□ -0.33
AL355916.1-202ENST00000508827 DIEXFQ68CQ4 756 aaKnown RBP12.98□□□□□ -0.33
AL355916.1-202ENST00000508827 ARXQ96QS3 562 aa12.97□□□□□ -0.33
AL355916.1-202ENST00000508827 CDK11AQ9UQ88 783 aaPredicted RBP12.97□□□□□ -0.33
AL355916.1-202ENST00000508827 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
AL355916.1-202ENST00000508827 UBE2Q2Q8WVN8 375 aa12.95□□□□□ -0.34
AL355916.1-202ENST00000508827 ABCC9O60706 1549 aa12.93□□□□□ -0.34
AL355916.1-202ENST00000508827 NEUROD1Q13562 356 aa12.92□□□□□ -0.34
AL355916.1-202ENST00000508827 C14orf37Q86TY3 774 aa12.91□□□□□ -0.34
AL355916.1-202ENST00000508827 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
AL355916.1-202ENST00000508827 VSIG10Q8N0Z9 540 aa12.89□□□□□ -0.35
AL355916.1-202ENST00000508827 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.89□□□□□ -0.35
AL355916.1-202ENST00000508827 HAP1P54257 671 aaPredicted RBP12.88□□□□□ -0.35
AL355916.1-202ENST00000508827 TULP1O00294 542 aaPredicted RBP12.87□□□□□ -0.35
AL355916.1-202ENST00000508827 CCDC136Q96JN2 1154 aa12.87□□□□□ -0.35
AL355916.1-202ENST00000508827 PDIA4P13667 645 aaKnown RBP12.86□□□□□ -0.35
AL355916.1-202ENST00000508827 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
AL355916.1-202ENST00000508827 RTN4Q9NQC3 1192 aaKnown RBP12.84□□□□□ -0.35
AL355916.1-202ENST00000508827 ANO8Q9HCE9 1232 aaPredicted RBP12.83□□□□□ -0.36
AL355916.1-202ENST00000508827 PTMSP20962 102 aa12.83□□□□□ -0.36
AL355916.1-202ENST00000508827 DEKP35659 375 aaKnown RBP12.83□□□□□ -0.36
AL355916.1-202ENST00000508827 NAP1L5Q96NT1 182 aaPredicted RBP12.83□□□□□ -0.36
AL355916.1-202ENST00000508827 NPM2Q86SE8 214 aaKnown RBP12.81□□□□□ -0.36
AL355916.1-202ENST00000508827 TRIM44Q96DX7 344 aaPredicted RBP12.81□□□□□ -0.36
AL355916.1-202ENST00000508827 ANP32AP39687 249 aaKnown RBP12.8□□□□□ -0.36
AL355916.1-202ENST00000508827 CNGB1Q14028 1251 aaPredicted RBP12.78□□□□□ -0.36
AL355916.1-202ENST00000508827 NBR1Q14596 966 aa12.78□□□□□ -0.36
AL355916.1-202ENST00000508827 BCANQ96GW7 911 aa12.78□□□□□ -0.36
AL355916.1-202ENST00000508827 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
AL355916.1-202ENST00000508827 TAF7LQ5H9L4 462 aa12.71□□□□□ -0.37
AL355916.1-202ENST00000508827 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.38
AL355916.1-202ENST00000508827 HSP90AA1P07900 732 aaKnown RBP12.68□□□□□ -0.38
AL355916.1-202ENST00000508827 HMGB1P09429 215 aaKnown RBP12.65□□□□□ -0.38
AL355916.1-202ENST00000508827 PABPN1Q86U42 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
AL355916.1-202ENST00000508827 APPP05067 770 aa12.62□□□□□ -0.39
AL355916.1-202ENST00000508827 HSP90AA2PQ14568 343 aaPredicted RBP12.62□□□□□ -0.39
AL355916.1-202ENST00000508827 NEFMP07197 916 aa12.61□□□□□ -0.39
AL355916.1-202ENST00000508827 ZBTB47Q9UFB7 747 aaPredicted RBP12.6□□□□□ -0.39
AL355916.1-202ENST00000508827 ANP32BQ92688 251 aaKnown RBP12.6□□□□□ -0.39
AL355916.1-202ENST00000508827 ATP1B4Q9UN42 357 aaPredicted RBP12.57□□□□□ -0.4
AL355916.1-202ENST00000508827 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
AL355916.1-202ENST00000508827 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
AL355916.1-202ENST00000508827 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
AL355916.1-202ENST00000508827 PLPPR3Q6T4P5 718 aa12.53□□□□□ -0.4
AL355916.1-202ENST00000508827 TPRNQ4KMQ1 711 aa12.49□□□□□ -0.41
AL355916.1-202ENST00000508827 BRD2P25440 801 aaKnown RBP12.49□□□□□ -0.41
AL355916.1-202ENST00000508827 HSP90B1P14625 803 aaKnown RBP12.48□□□□□ -0.41
AL355916.1-202ENST00000508827 TRIM41Q8WV44 630 aa12.47□□□□□ -0.41
AL355916.1-202ENST00000508827 TIMELESSQ9UNS1 1208 aa12.46□□□□□ -0.41
AL355916.1-202ENST00000508827 FKBP8Q14318 412 aa12.45□□□□□ -0.42
AL355916.1-202ENST00000508827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.42□□□□□ -0.42
AL355916.1-202ENST00000508827 HNRNPUL2Q1KMD3 747 aaKnown RBP12.42□□□□□ -0.42
AL355916.1-202ENST00000508827 CCDC9Q9Y3X0 531 aaKnown RBP12.42□□□□□ -0.42
AL355916.1-202ENST00000508827 PPM1GO15355 546 aaPredicted RBP12.41□□□□□ -0.42
AL355916.1-202ENST00000508827 UBTFP17480 764 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms